##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1632028.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12689 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03640948853337 33.0 31.0 34.0 30.0 34.0 2 32.19063756009142 33.0 31.0 34.0 30.0 34.0 3 32.124438490030734 34.0 31.0 34.0 30.0 34.0 4 35.802663724485775 37.0 35.0 37.0 35.0 37.0 5 35.63858460083537 37.0 35.0 37.0 33.0 37.0 6 35.700291591141934 37.0 35.0 37.0 33.0 37.0 7 35.67475766411853 37.0 35.0 37.0 33.0 37.0 8 35.67129009378202 37.0 35.0 37.0 33.0 37.0 9 37.25959492473796 39.0 37.0 39.0 34.0 39.0 10 37.210103239025926 39.0 37.0 39.0 34.0 39.0 11 37.33525100480731 39.0 37.0 39.0 34.0 39.0 12 37.28993616518244 39.0 37.0 39.0 34.0 39.0 13 37.370714792339825 39.0 37.0 39.0 34.0 39.0 14 38.435574119315945 40.0 38.0 41.0 34.0 41.0 15 38.44046024115376 40.0 38.0 41.0 34.0 41.0 16 38.25801875640318 40.0 38.0 41.0 34.0 41.0 17 38.36779888092048 40.0 38.0 41.0 34.0 41.0 18 38.485696272361885 40.0 38.0 41.0 34.0 41.0 19 38.50484671762944 40.0 38.0 41.0 34.0 41.0 20 38.56773583418709 40.0 38.0 41.0 34.0 41.0 21 38.55804239892821 40.0 38.0 41.0 34.0 41.0 22 38.507999054299 40.0 38.0 41.0 34.0 41.0 23 38.441327133737886 40.0 38.0 41.0 34.0 41.0 24 38.307510442115216 40.0 38.0 41.0 34.0 41.0 25 38.233351721963906 40.0 38.0 41.0 34.0 41.0 26 38.071636850815665 40.0 37.0 41.0 33.0 41.0 27 37.95815273071164 40.0 37.0 41.0 33.0 41.0 28 37.89282055323508 40.0 37.0 41.0 33.0 41.0 29 37.701000866892585 40.0 37.0 41.0 33.0 41.0 30 37.63133422649539 39.0 37.0 41.0 33.0 41.0 31 37.415320356214046 39.0 36.0 41.0 33.0 41.0 32 37.179446764914495 39.0 36.0 40.0 32.0 41.0 33 36.89203246906769 39.0 35.0 40.0 31.0 41.0 34 36.88076286547403 39.0 35.0 40.0 31.0 41.0 35 36.78272519505083 39.0 35.0 40.0 31.0 41.0 36 36.65734100401923 39.0 35.0 40.0 31.0 41.0 37 36.63251635274647 39.0 35.0 40.0 31.0 41.0 38 36.490345968949484 39.0 35.0 40.0 31.0 41.0 39 36.15146977697218 38.0 35.0 40.0 30.0 41.0 40 36.05358972338246 38.0 35.0 40.0 30.0 41.0 41 35.95965009062968 38.0 35.0 40.0 29.0 41.0 42 35.66467018677595 38.0 35.0 40.0 28.0 41.0 43 34.7723224840413 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 17 1.0 18 2.0 19 0.0 20 2.0 21 7.0 22 7.0 23 14.0 24 27.0 25 39.0 26 55.0 27 69.0 28 133.0 29 155.0 30 208.0 31 266.0 32 340.0 33 442.0 34 538.0 35 863.0 36 1338.0 37 2245.0 38 3415.0 39 2523.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.468121995429115 18.70911813381669 16.35274647332335 24.470013397430847 2 19.457798092836313 21.735361336590746 32.642446213255575 26.16439435731736 3 19.646938293009693 22.413113720545354 35.22736228229174 22.712585704153206 4 13.846638821026087 17.98408069981874 29.33249271022145 38.836787768933725 5 14.114587437938372 35.07762629048782 32.7921822050595 18.015604066514303 6 32.153834029474346 31.917408779257624 15.391283789108675 20.53747340215935 7 25.565450390101663 33.33596028055796 17.85798723303649 23.240602096303885 8 31.925289620931512 30.349121286153363 18.40176530853495 19.323823784380174 9 25.45511860666719 12.451729844747419 17.834344708014815 44.25880684057057 10 21.175821577744504 24.91922137284262 27.133737883205928 26.77121916620695 11 33.123177555362915 20.80542201907164 18.58302466703444 27.48837575853101 12 19.94641027661754 30.617069903065648 23.89471195523682 25.541807865079992 13 34.17921033966428 17.353613365907478 23.027819371108833 25.439356923319412 14 24.23358814721412 23.58735912995508 23.532193238237845 28.64685948459296 15 29.52951375206872 25.77035227362282 19.993695326660887 24.70643864764757 16 27.835132792182204 22.90960674600047 23.965639530301836 25.28962093151549 17 19.970052801639216 31.75979194577981 23.138151154543305 25.13200409803767 18 23.555835763259516 21.703837969895183 25.52604618173221 29.214280085113092 19 22.57861139569706 28.89116557648357 26.25108361573016 22.27913941208921 20 23.77649933012846 21.625029553156278 28.06367720072504 26.534793915990228 21 27.28347387500985 21.246749152809517 28.126723934116164 23.343053038064465 22 26.479628024272994 23.70557175506344 24.39120498069194 25.42359523997163 23 26.755457482859168 22.223973520371977 26.203798565686814 24.816770431082038 24 22.633777287414294 24.162660572149104 26.337772874142956 26.86578926629364 25 22.78351327921822 24.580345180865315 28.118843092442276 24.51729844747419 26 22.807155804239894 26.282606982425722 26.479628024272994 24.430609189061393 27 22.208211837024194 26.006777523839546 27.173142091575382 24.61186854756088 28 22.515564662305934 24.00504373867129 29.14335251004807 24.336039088974704 29 20.93151548585389 25.699424698557806 27.102214516510365 26.26684529907794 30 21.246749152809517 23.80014185515013 31.89376625423595 23.059342737804396 31 22.042714161872485 24.39120498069194 27.236188824966508 26.329892032469065 32 22.67318149578375 25.100480731342106 29.466467018677594 22.759870754196548 33 21.585625344786823 24.864055481125387 30.223027819371108 23.327291354716685 34 22.74410907084877 26.68452990779415 27.007644416423677 23.563716604933408 35 21.175821577744504 23.28788714634723 32.870990621798406 22.66530065410986 36 22.58649223737095 25.75459059027504 25.801875640318382 25.857041532035623 37 21.36496177791788 24.485775080778627 29.151233351721963 24.998029789581526 38 22.239735203719757 22.89384506265269 29.277326818504218 25.589092915123334 39 22.90960674600047 23.319410513042794 29.261565135156438 24.509417605800298 40 19.92276775159587 21.877216486720783 33.91914256442588 24.280873197257467 41 21.215225786113955 22.65741981243597 29.395539443612577 26.731814957837496 42 19.40263220111908 22.034833320198597 34.273780439750965 24.288754038931355 43 18.622428875403894 22.19245015367641 33.1310583970368 26.05406257388289 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 1.0 3 7.5 4 14.0 5 14.0 6 18.0 7 22.0 8 17.5 9 13.0 10 24.5 11 36.0 12 36.0 13 76.0 14 116.0 15 188.0 16 260.0 17 245.5 18 231.0 19 231.0 20 241.5 21 252.0 22 184.0 23 116.0 24 121.0 25 126.0 26 126.0 27 139.5 28 153.0 29 175.5 30 198.0 31 213.5 32 229.0 33 229.0 34 245.5 35 262.0 36 281.0 37 300.0 38 332.0 39 364.0 40 364.0 41 418.0 42 472.0 43 547.0 44 622.0 45 741.0 46 860.0 47 860.0 48 960.0 49 1060.0 50 1166.5 51 1273.0 52 1096.5 53 920.0 54 920.0 55 1101.5 56 1283.0 57 1175.5 58 1068.0 59 834.5 60 601.0 61 601.0 62 539.0 63 477.0 64 420.5 65 364.0 66 329.5 67 295.0 68 295.0 69 268.0 70 241.0 71 206.5 72 172.0 73 152.0 74 132.0 75 132.0 76 116.5 77 101.0 78 63.5 79 26.0 80 21.5 81 17.0 82 17.0 83 11.5 84 6.0 85 4.5 86 3.0 87 2.0 88 1.0 89 1.0 90 1.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 12689.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 80.04570888170856 #Duplication Level Percentage of deduplicated Percentage of total 1 93.03928325292901 74.47395381826779 2 5.159003642807916 8.259122074237528 3 1.0239243871221817 2.4588226022539206 4 0.29536280397755243 0.9457010008668925 5 0.15752682878802796 0.6304673339112618 6 0.08860884119326573 0.4255654503901017 7 0.049227133996258735 0.275829458586177 8 0.019690853598503495 0.12609346678225233 9 0.009845426799251747 0.07092757506501694 >10 0.06891798759476223 1.2215304594530696 >50 0.019690853598503495 1.4658365513436835 >100 0.06891798759476223 9.646150208842304 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTCTT 345 2.718890377492316 Illumina PCR Primer Index 10 (95% over 21bp) CATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTC 176 1.3870281346047757 No Hit CTTATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGT 160 1.2609346678225235 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 157 1.237292142800851 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 151 1.1900070927575066 No Hit ACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCC 123 0.969343525888565 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 112 0.8826542674757665 No Hit CTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTCTTC 95 0.7486799590196233 Illumina PCR Primer Index 10 (95% over 22bp) ATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATG 91 0.7171565923240603 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 44 0.3467570336511939 No Hit CACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCG 40 0.3152336669556309 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 22 0.17337851682559696 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14 0.11033178343447081 No Hit ATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTCT 13 0.10245094176058002 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 0.0 0.0 22 0.0 0.0 0.0 0.0 0.0 23 0.0 0.0 0.0 0.00788084167389077 0.0 24 0.0 0.0 0.0 0.00788084167389077 0.0 25 0.0 0.0 0.0 0.01576168334778154 0.0 26 0.0 0.0 0.0 0.03152336669556308 0.0 27 0.0 0.0 0.0 0.04728505004334463 0.0 28 0.0 0.0 0.0 0.10245094176058003 0.0 29 0.0 0.0 0.0 0.23642525021672314 0.0 30 0.0 0.0 0.0 0.40980376704232013 0.0 31 0.0 0.0 0.0 0.8038458507368587 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTCTT 60 3.6585334E-8 27.750002 37 GCCGTCT 60 3.6585334E-8 27.750002 36 GGTATCA 100 0.0 25.900002 1 GTATCAA 125 1.2732926E-11 20.72 2 ATGCCGT 90 1.8315768E-6 18.5 34 TGCCGTC 95 3.0719002E-6 17.526316 35 TATGCCG 100 5.0112194E-6 16.650002 33 AATCTCG 120 1.5952701E-6 15.416667 26 TCTCGTA 110 1.2399909E-5 15.136364 28 CGTATGC 110 1.2399909E-5 15.136364 31 TCGTATG 110 1.2399909E-5 15.136364 30 TCTCCGA 110 1.2399909E-5 15.136364 1 GAGTACT 75 0.003813933 14.8 13 GTATGCC 115 1.8890607E-5 14.478261 32 ATCTCGT 115 1.8890607E-5 14.478261 27 TCCGAGC 115 1.8890607E-5 14.478261 3 CTCGTAT 115 1.8890607E-5 14.478261 29 CTCCGAG 115 1.8890607E-5 14.478261 2 ATCAACG 180 2.3064786E-9 14.388889 4 TATCAAC 185 3.3978722E-9 14.0 3 >>END_MODULE