##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1632015.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2961545 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3502202397735 33.0 31.0 34.0 31.0 34.0 2 32.54004008043099 34.0 31.0 34.0 31.0 34.0 3 32.62587399482365 34.0 31.0 34.0 31.0 34.0 4 36.15296644150266 37.0 35.0 37.0 35.0 37.0 5 35.92253671647738 37.0 35.0 37.0 35.0 37.0 6 35.92882735193961 37.0 35.0 37.0 35.0 37.0 7 35.90545678016036 37.0 35.0 37.0 35.0 37.0 8 35.88680266550061 37.0 35.0 37.0 35.0 37.0 9 37.619799800441996 39.0 37.0 39.0 35.0 39.0 10 37.52141567999136 39.0 37.0 39.0 35.0 39.0 11 37.605965467348966 39.0 37.0 39.0 35.0 39.0 12 37.553594829725704 39.0 37.0 39.0 35.0 39.0 13 37.592877366374644 39.0 37.0 39.0 35.0 39.0 14 38.881106989763786 40.0 38.0 41.0 36.0 41.0 15 38.86691372239827 40.0 38.0 41.0 36.0 41.0 16 38.865082245922316 40.0 38.0 41.0 36.0 41.0 17 38.83544197369954 40.0 38.0 41.0 36.0 41.0 18 38.81915149018502 40.0 38.0 41.0 36.0 41.0 19 38.83991193785676 40.0 38.0 41.0 35.0 41.0 20 38.8077034115639 40.0 38.0 41.0 35.0 41.0 21 38.7769981546794 40.0 38.0 41.0 35.0 41.0 22 38.74150992134173 40.0 38.0 41.0 35.0 41.0 23 38.687627910431885 40.0 38.0 41.0 35.0 41.0 24 38.6269849014619 40.0 38.0 41.0 35.0 41.0 25 38.558605390092 40.0 38.0 41.0 34.0 41.0 26 38.453118895711526 40.0 38.0 41.0 34.0 41.0 27 38.36351802859656 40.0 38.0 41.0 34.0 41.0 28 38.28770287130535 40.0 38.0 41.0 34.0 41.0 29 38.213749580033394 40.0 38.0 41.0 34.0 41.0 30 38.1367124254401 40.0 38.0 41.0 34.0 41.0 31 38.062713887514796 40.0 38.0 41.0 33.0 41.0 32 37.97256870991324 40.0 37.0 41.0 33.0 41.0 33 37.88278483021531 40.0 37.0 41.0 33.0 41.0 34 37.80164306130753 40.0 37.0 41.0 33.0 41.0 35 37.772535281415614 40.0 37.0 41.0 33.0 41.0 36 37.73567411604416 40.0 37.0 41.0 33.0 41.0 37 37.67556191109708 40.0 37.0 41.0 33.0 41.0 38 37.62281714442968 40.0 37.0 41.0 33.0 41.0 39 37.56804944716356 40.0 37.0 41.0 33.0 41.0 40 37.49278704189874 39.0 37.0 41.0 33.0 41.0 41 37.4462670666831 39.0 36.0 41.0 32.0 41.0 42 37.38684673033839 39.0 36.0 41.0 32.0 41.0 43 36.465244998809744 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 1.0 12 0.0 13 0.0 14 5.0 15 7.0 16 19.0 17 32.0 18 78.0 19 146.0 20 313.0 21 587.0 22 1120.0 23 1852.0 24 3149.0 25 4968.0 26 7441.0 27 11065.0 28 15831.0 29 22345.0 30 30659.0 31 40910.0 32 54714.0 33 75631.0 34 107413.0 35 156910.0 36 247594.0 37 441936.0 38 916060.0 39 820754.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.220244838420484 17.46331728878001 11.711150767589213 27.605287105210287 2 20.78820345461575 19.332915758497677 32.10243302060242 27.77644776628415 3 21.408015073213473 20.433388653557518 27.677850581368844 30.48074569186016 4 16.43412475582846 14.735383051751704 31.38959563336029 37.440896559059546 5 17.701537542059974 33.33169004691808 31.658205429936064 17.308566981085885 6 37.800371090089804 31.81518430413855 14.402178592592719 15.982266013178931 7 31.834701144166306 27.728094626284594 19.420167513915878 21.017036715633225 8 28.507350048707686 31.149653305960236 18.681499014872305 21.661497630459777 9 27.562944341551454 13.492923457181977 18.175479352837794 40.76865284842878 10 18.768514407175985 24.582574298212588 31.08688201597477 25.562029278636654 11 38.71823659610102 19.775590105840028 19.620873564305118 21.885299733753836 12 23.63982313285802 23.115941172597413 27.091838888147908 26.15239680639666 13 32.49331007970502 17.73766733242277 22.07746294586103 27.691559642011182 14 24.4995770788558 18.887033626029655 22.551033328887456 34.06235596622709 15 27.506318492543585 25.466234684936413 19.879150916160317 27.14829590635969 16 27.60575983143933 23.71873464694948 21.768671419816346 26.906834101794843 17 26.258827740250446 24.064466351178186 22.937149359540378 26.739556549030997 18 26.58828415573628 22.942281815741445 23.75044107045478 26.718992958067496 19 27.02440786819042 23.263499288378195 23.34274846406183 26.36934437936955 20 27.175410132211397 22.93471819607671 23.152813818463 26.737057853248896 21 27.440947208298372 23.051245211536546 22.80947951153874 26.698328068626342 22 27.553253453856012 22.930227296900775 22.54154503814732 26.974974211095898 23 26.978452125495306 22.823593766091683 22.897507888618946 27.30044621979406 24 26.962885926096007 23.32056409745589 22.685861602643214 27.03068837380489 25 27.206036038621733 22.62616303314655 22.82659895426205 27.34120197396967 26 26.972070321403187 23.27379796693955 22.981619391229916 26.772512320427346 27 27.085389551737354 22.859723556454487 22.783783464374167 27.27110342743399 28 26.676413831294138 23.10317756441317 23.281125223489767 26.939283380802927 29 26.440152015248795 23.370099053028063 23.37793280196654 26.8118161297566 30 26.24572647047403 23.5538882576493 23.197013720878797 27.003371550997873 31 27.0155273683162 23.133972301619593 22.72425372567359 27.126246604390612 32 26.349996370137884 23.02254397620161 23.066271152388364 27.561188501272138 33 26.148716295041947 22.89372607878658 23.635534830637386 27.32202279553409 34 26.87877442348504 22.504841223077822 23.4685611733065 27.147823180130644 35 26.53672323061105 22.619578632099124 24.018780737756813 26.824917399533017 36 25.988732232669097 22.733640717936076 23.95070816077419 27.32691888862064 37 25.995451698353396 21.819084295528178 24.672932540278808 27.512531465839622 38 25.40724520478331 21.74722990871319 25.573914966681244 27.271609919822254 39 25.11374974886419 21.42364880493121 26.001023114624296 27.461578331580306 40 24.926854057594937 21.509347317025405 26.444237720514124 27.119560904865537 41 24.320785265798765 21.58684065242973 27.089542789321115 27.00283129245039 42 24.35394363415042 21.752700026506435 27.068742835243093 26.824613504100054 43 23.697023006572582 21.21379212539401 27.449625111217284 27.639559756816123 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 63.5 2 76.0 3 168.5 4 261.0 5 261.0 6 351.0 7 441.0 8 455.5 9 470.0 10 637.0 11 804.0 12 804.0 13 1410.0 14 2016.0 15 2889.0 16 3762.0 17 3989.0 18 4216.0 19 4216.0 20 5421.0 21 6626.0 22 7159.5 23 7693.0 24 10072.0 25 12451.0 26 12451.0 27 15850.5 28 19250.0 29 24417.5 30 29585.0 31 36335.5 32 43086.0 33 43086.0 34 52906.0 35 62726.0 36 74159.5 37 85593.0 38 97781.5 39 109970.0 40 109970.0 41 121171.0 42 132372.0 43 144112.5 44 155853.0 45 167907.5 46 179962.0 47 179962.0 48 191478.0 49 202994.0 50 212474.0 51 221954.0 52 228683.0 53 235412.0 54 235412.0 55 236520.0 56 237628.0 57 240107.0 58 242586.0 59 237755.0 60 232924.0 61 232924.0 62 216621.5 63 200319.0 64 179834.5 65 159350.0 66 140533.0 67 121716.0 68 121716.0 69 104779.0 70 87842.0 71 75722.5 72 63603.0 73 51162.0 74 38721.0 75 38721.0 76 31369.5 77 24018.0 78 19375.0 79 14732.0 80 12192.0 81 9652.0 82 9652.0 83 7344.0 84 5036.0 85 4133.0 86 3230.0 87 2436.0 88 1642.0 89 1642.0 90 1182.0 91 722.0 92 437.0 93 152.0 94 93.0 95 34.0 96 34.0 97 21.0 98 8.0 99 7.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2961545.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 58.94093996903251 #Duplication Level Percentage of deduplicated Percentage of total 1 82.43548596404065 48.58825029524542 2 9.563300321101714 11.273398202637711 3 3.0584028540212227 5.407954170599478 4 1.4235205902783215 3.356145666251051 5 0.8163805566952613 2.4059118692030372 6 0.5427038394753061 1.919248465408649 7 0.3767070613205303 1.5542427801042817 8 0.27487379917178106 1.2961056076835076 9 0.21443940823571106 1.1375334259034313 >10 1.1648351277769222 12.311087261817047 >50 0.07605486949230239 3.1055937730182936 >100 0.04864466498907445 5.676268075811967 >500 0.004191590966778874 1.61899723717789 >1k 4.59352434632211E-4 0.3492631691382904 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 3.376615921757056E-5 0.0 0.0 0.0 3 0.0 3.376615921757056E-5 0.0 0.0 0.0 4 0.0 3.376615921757056E-5 0.0 0.0 0.0 5 0.0 3.376615921757056E-5 0.0 0.0 0.0 6 0.0 3.376615921757056E-5 0.0 0.0 0.0 7 0.0 3.376615921757056E-5 0.0 0.0 0.0 8 0.0 3.376615921757056E-5 0.0 0.0 0.0 9 0.0 3.376615921757056E-5 0.0 3.376615921757056E-5 0.0 10 0.0 3.376615921757056E-5 0.0 6.753231843514112E-5 0.0 11 0.0 3.376615921757056E-5 0.0 6.753231843514112E-5 0.0 12 0.0 3.376615921757056E-5 0.0 6.753231843514112E-5 0.0 13 0.0 3.376615921757056E-5 0.0 6.753231843514112E-5 0.0 14 0.0 6.753231843514112E-5 0.0 6.753231843514112E-5 0.0 15 0.0 6.753231843514112E-5 0.0 1.3506463687028224E-4 0.0 16 0.0 6.753231843514112E-5 0.0 3.0389543295813505E-4 0.0 17 0.0 6.753231843514112E-5 0.0 4.3896006982841726E-4 0.0 18 0.0 6.753231843514112E-5 0.0 5.064923882635583E-4 0.0 19 0.0 6.753231843514112E-5 0.0 5.740247066986995E-4 0.0 20 0.0 6.753231843514112E-5 0.0 7.428555027865522E-4 0.0 21 0.0 6.753231843514112E-5 0.0 8.779201396568345E-4 0.0 22 0.0 6.753231843514112E-5 0.0 0.0012493478910501107 0.0 23 0.0 6.753231843514112E-5 0.0 0.001992203393836663 0.0 24 0.0 1.0129847765271167E-4 0.0 0.0034103820809746263 0.0 25 0.0 1.0129847765271167E-4 0.0 0.004524665335154455 0.0 26 0.0 1.0129847765271167E-4 0.0 0.007394788868647952 0.0 27 0.0 1.0129847765271167E-4 0.0 0.026202539552834754 0.0 28 0.0 1.0129847765271167E-4 0.0 0.08883876490142814 0.0 29 0.0 1.0129847765271167E-4 0.0 0.16714248812697427 0.0 30 0.0 1.0129847765271167E-4 0.0 0.2707370646064807 0.0 31 0.0 1.0129847765271167E-4 0.0 0.5954324516426392 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1080 0.0 23.46759 1 TAACACG 105 4.803587E-7 17.619047 4 TTATACG 90 4.4497658E-5 16.444445 4 GTATCAA 1605 0.0 15.791276 2 TCTTATA 3380 0.0 15.544378 37 CTTATAC 2100 0.0 14.535714 37 CCGATCG 390 0.0 14.23077 18 CTCTTAT 5370 0.0 14.021415 37 GGACCGT 210 2.044544E-9 13.214285 6 TCGCACG 435 0.0 13.183908 22 CGATCGC 445 0.0 12.47191 19 GTTATTC 445 0.0 12.47191 3 TAGATAA 470 0.0 12.202128 4 TATACTG 290 1.2732926E-11 12.120689 5 TTAATAC 275 6.184564E-11 12.109091 3 TATACAG 310 3.6379788E-12 11.935484 5 CTAGATA 470 0.0 11.808511 3 TAATACC 300 2.1827873E-11 11.716667 4 TACACCG 160 3.767349E-5 11.5625 5 ATAGACT 195 1.962957E-6 11.384616 4 >>END_MODULE