FastQCFastQC Report
Fri 10 Feb 2017
ERR1631998.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631998.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences903370
Sequences flagged as poor quality0
Sequence length43
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCTATC358.867918E-426.42857212
GGTATCA6000.026.2083341
TCTAGCG551.9020737E-523.54545428
CGAACGA555.1419216E-420.18181816
CTATACA951.6751255E-719.4736844
CTAGCGG701.2188303E-418.529
ATTATAC650.001579579717.0769233
TAGTACT650.001579579717.0769234
GTATCAA8900.017.0449452
GTTCTGA1554.0017767E-1016.7096791
GACGGAC1059.338586E-615.8571447
TAGACCA1403.4697223E-815.8571434
CTTATAC8550.015.36257337
TCCTATA855.3625734E-415.2352932
TATACTG855.3625734E-415.2352935
TTCGCGG855.3625734E-415.23529331
CAATACG855.3625734E-415.2352931
CCTATAC1508.0932296E-814.83
ACGAACG750.004103500414.815
CTCCGTG1001.09295244E-414.7999997
Produced by FastQC (version 0.11.5)