ERR1631965.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631965.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	255008
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	547	0.21450307441335173	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	516	0.2023465930480612	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	499	0.19568013552516	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	469	0.18391579872004016	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	454	0.17803363031748023	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	447	0.17528861839628562	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	438	0.17175931735474967	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	411	0.1611714142301418	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	411	0.1611714142301418	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	400	0.1568578240682645	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	373	0.14626992094365665	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	369	0.14470134270297402	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	349	0.1368584514995608	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	307	0.12038837997239303	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	307	0.12038837997239303	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	283	0.11097691052829717	No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA	278	0.10901618772744386	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	276	0.10823189860710253	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	262	0.10274187476471326	No Hit
CTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA	261	0.10234973020454259	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAACTAA	25	0.005488426	29.599998	34
TGAACTA	25	0.005488426	29.599998	33
AGGGGTC	25	0.005488426	29.599998	7
CGGAGAC	25	0.005488426	29.599998	10
GGTATCA	355	0.0	29.1831	1
TAGGACC	45	1.3192713E-4	24.666666	4
CTCTAGA	45	1.3192713E-4	24.666666	1
AGGACCG	55	1.8951416E-5	23.545454	5
CCTTGCC	55	1.8951416E-5	23.545454	9
GACCGTT	40	0.0019270907	23.125002	7
TAAACCA	40	0.0019270907	23.125002	5
CGCCGTT	40	0.0019270907	23.125002	25
GGACCGT	50	2.6941203E-4	22.199999	6
AGTACCT	70	5.076279E-6	21.142857	37
GCCTTAG	45	0.0038177709	20.555555	2
GGGTCGA	45	0.0038177709	20.555555	9
GTTACGG	45	0.0038177709	20.555555	17
AGAGAAT	55	5.128024E-4	20.181818	8
CTTATAC	350	0.0	20.085714	37
GTATCAA	530	0.0	19.198114	2