FastQCFastQC Report
Fri 10 Feb 2017
ERR1631959.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631959.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7204
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA190.2637423653525819No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA190.2637423653525819No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA180.2498611882287618No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA180.2498611882287618No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT170.2359800111049417No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC160.22209883398112162No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTC160.22209883398112162No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA120.1665741254858412No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT110.1526929483620211No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA110.1526929483620211No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC100.13881177123820101No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAC100.13881177123820101No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA100.13881177123820101No Hit
GGCACGGAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATG100.13881177123820101No Hit
GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTA90.1249305941143809No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA90.1249305941143809No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATC90.1249305941143809No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGA90.1249305941143809No Hit
GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCC90.1249305941143809No Hit
CATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCA90.1249305941143809No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT90.1249305941143809No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT80.11104941699056081No Hit
GGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACC80.11104941699056081No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC80.11104941699056081No Hit
GTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTTAT80.11104941699056081No Hit
TTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACTTCA80.11104941699056081No Hit
GAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA80.11104941699056081No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)