ERR1631948.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631948.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	589466
Sequences flagged as poor quality	0
Sequence length	43
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	828	0.140466116790451	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	804	0.136394635144351	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	771	0.13079634788096345	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	709	0.12027835362853838	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	708	0.12010870855995089	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	699	0.11858190294266335	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	681	0.11552829170808833	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	666	0.11298361567927583	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	649	0.1100996495132883	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	603	0.10229597635826324	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	596	0.10110846087815074	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACTAGTC	25	0.005494198	29.6	3
ATCTTAT	25	0.005494198	29.6	1
GTACTAT	25	0.005494198	29.6	1
GGTATCA	670	0.0	28.164177	1
CGTTATT	55	6.253049E-7	26.90909	10
AGGACCG	100	0.0	25.900002	5
TGTTACG	50	9.081279E-6	25.900002	16
GACCGTT	105	1.8189894E-12	24.666666	7
CTTGGAC	75	1.3707904E-8	24.666666	3
GGACCGT	115	0.0	24.130436	6
TAATACT	80	2.7201168E-8	23.125002	4
ATTAGAG	85	5.1699317E-8	21.764706	3
GTAAGAC	45	0.0038236296	20.555557	3
GTATTAG	165	0.0	20.181818	1
GTTAGGA	55	5.139009E-4	20.181818	2
CTTAGGA	230	0.0	20.108696	2
CTAAGTC	65	6.8948415E-5	19.923077	34
GTCTAGG	65	6.8948415E-5	19.923077	1
TTGTTAC	65	6.8948415E-5	19.923077	15
ATTAGCT	105	2.2539098E-8	19.38095	3