##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631945.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 740564 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.54257970951869 34.0 31.0 34.0 31.0 34.0 2 32.71478899865508 34.0 31.0 34.0 31.0 34.0 3 32.80121096893719 34.0 31.0 34.0 31.0 34.0 4 36.24209116295148 37.0 37.0 37.0 35.0 37.0 5 36.15726662381644 37.0 35.0 37.0 35.0 37.0 6 36.21467557159138 37.0 36.0 37.0 35.0 37.0 7 36.205223316283266 37.0 36.0 37.0 35.0 37.0 8 36.181846538584104 37.0 36.0 37.0 35.0 37.0 9 38.006532858740094 39.0 38.0 39.0 35.0 39.0 10 37.93488071253801 39.0 38.0 39.0 35.0 39.0 11 38.0087136290719 39.0 38.0 39.0 35.0 39.0 12 37.94179031116825 39.0 38.0 39.0 35.0 39.0 13 38.00002970708811 39.0 38.0 39.0 35.0 39.0 14 39.3762132644849 40.0 39.0 41.0 37.0 41.0 15 39.3762132644849 40.0 39.0 41.0 36.0 41.0 16 39.32444461248454 40.0 39.0 41.0 36.0 41.0 17 39.295852890499674 40.0 39.0 41.0 36.0 41.0 18 39.313605576290506 40.0 39.0 41.0 36.0 41.0 19 39.33893627019407 40.0 39.0 41.0 36.0 41.0 20 39.337615655095306 40.0 39.0 41.0 36.0 41.0 21 39.30124202634749 40.0 39.0 41.0 36.0 41.0 22 39.28082245423758 40.0 39.0 41.0 36.0 41.0 23 39.213450829367886 40.0 39.0 41.0 36.0 41.0 24 39.23085243139013 40.0 39.0 41.0 36.0 41.0 25 39.171847402790306 40.0 39.0 41.0 36.0 41.0 26 39.1039626554896 40.0 39.0 41.0 36.0 41.0 27 38.998914340961754 40.0 39.0 41.0 35.0 41.0 28 38.989787513300676 40.0 39.0 41.0 35.0 41.0 29 38.973549889003515 40.0 38.0 41.0 35.0 41.0 30 38.931359072274645 40.0 38.0 41.0 35.0 41.0 31 38.84972939543375 40.0 38.0 41.0 35.0 41.0 32 38.79643758000659 40.0 38.0 41.0 35.0 41.0 33 38.74077864978584 40.0 38.0 41.0 35.0 41.0 34 38.71096623654404 40.0 38.0 41.0 35.0 41.0 35 38.64961839894999 40.0 38.0 41.0 35.0 41.0 36 38.602254497923205 40.0 38.0 41.0 35.0 41.0 37 38.561397799514964 40.0 38.0 41.0 35.0 41.0 38 38.513757082439874 40.0 38.0 41.0 35.0 41.0 39 38.44344985713591 40.0 38.0 41.0 34.0 41.0 40 38.15456732976488 40.0 38.0 41.0 34.0 41.0 41 38.22029156156659 40.0 37.0 41.0 34.0 41.0 42 38.20093334269557 40.0 37.0 41.0 34.0 41.0 43 37.72744151754608 40.0 37.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 1.0 13 0.0 14 0.0 15 0.0 16 1.0 17 6.0 18 5.0 19 12.0 20 26.0 21 53.0 22 113.0 23 217.0 24 374.0 25 633.0 26 1070.0 27 1595.0 28 2608.0 29 3668.0 30 5270.0 31 7239.0 32 9591.0 33 13476.0 34 19214.0 35 28510.0 36 44603.0 37 80220.0 38 184654.0 39 337403.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.60482551136701 16.873355982737483 13.034254973236614 27.487563532658893 2 20.10494704036383 20.065517632507117 33.58602362523698 26.243511701892068 3 20.92756331660734 20.440637136020655 29.759075515417976 28.87272403195402 4 15.347491911570103 16.35982845506938 34.281169487039605 34.01151014632091 5 16.277863898326142 33.58858923739204 33.81436310703734 16.319183757244478 6 33.32122544439103 34.09685050853133 15.907875619122722 16.67404842795491 7 29.72666778293301 28.458040088365085 20.494244926839546 21.321047201862363 8 26.4518664153267 31.752556159899754 20.521926531670456 21.273650893103095 9 27.871325098168427 13.567902301489134 18.286468151300898 40.274304449041544 10 18.85414359866264 24.377501471851186 30.508234264695556 26.26012066479062 11 37.674124045997374 20.437531394990845 19.725911602508358 22.162432956503423 12 22.199971913298512 24.471348863838912 27.275157852663646 26.05352137019893 13 33.63598554615131 18.378965221101755 22.037663186436284 25.94738604631065 14 23.666151743806072 20.625631275622364 23.686946705483926 32.02127027508764 15 28.703528661938737 25.140568539653565 20.79550180673109 25.360400991676613 16 25.137732863061125 24.943151435932613 22.996932067991423 26.92218363301484 17 25.988570873010303 24.698743120108457 22.57050032137668 26.74218568550456 18 25.668949611377272 22.53134097795734 24.397351207998227 27.402358202667155 19 27.26124953413884 23.245661414813572 24.260968667123976 25.232120383923608 20 28.566200895533672 21.883996521570044 23.992524616373466 25.55727796652281 21 26.465369637195437 23.316283265187074 22.956962531259958 27.26138456635753 22 27.032504955682423 23.683705932235434 22.521213561555786 26.762575550526357 23 26.569074381147338 23.43389632766378 23.44523903403352 26.551790257155357 24 27.145121826067697 22.768727618409752 23.676819289082378 26.409331266440173 25 27.109068223678168 22.816529023825087 23.961737270512746 26.112665481984 26 26.877623000848 23.548268616891992 23.304265397723896 26.269842984536112 27 26.318724647700943 22.66947893767453 24.50132601638751 26.51047039823702 28 25.469101927719954 23.73015701546389 23.347205643266484 27.453535413549673 29 26.318454583263566 24.265829826996722 23.27010224639599 26.145613343343722 30 26.019898347745773 23.371916539286275 24.35751670348545 26.250668409482504 31 26.980247487050413 23.237424449473647 23.69666902522942 26.08565903824653 32 24.81081986161898 23.294948174634467 24.024392219983685 27.869839743762864 33 25.15056092383643 22.878778876639966 25.298691267736483 26.671968931787127 34 25.52662565288078 22.931441441928044 24.69766286235896 26.844270042832218 35 25.21443116327556 24.113378452098672 24.912634154509266 25.759556230116505 36 25.48733127724275 23.157215311573342 25.41427884693288 25.94117456425103 37 26.218530741434908 22.44789106680854 24.93666988943562 26.39690830232093 38 25.24359812251203 22.225087905974366 25.943605144187405 26.5877088273262 39 24.828644114485716 21.45769980717399 26.855882813639337 26.857773264700956 40 24.710220858696886 22.03887847640447 27.465013152138102 25.785887512760546 41 23.10671326178426 21.658357684143436 28.33097477058026 26.903954283492045 42 22.18930436802221 21.95029734094555 28.611976817668694 27.248421473363543 43 21.35115938662965 22.697565639161503 28.596448112519646 27.354826861689197 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 9.0 1 8.5 2 8.0 3 25.0 4 42.0 5 42.0 6 55.5 7 69.0 8 81.5 9 94.0 10 151.5 11 209.0 12 209.0 13 410.5 14 612.0 15 1254.0 16 1896.0 17 1886.5 18 1877.0 19 1877.0 20 2160.0 21 2443.0 22 2281.0 23 2119.0 24 2391.0 25 2663.0 26 2663.0 27 3061.0 28 3459.0 29 4985.0 30 6511.0 31 7450.5 32 8390.0 33 8390.0 34 10482.0 35 12574.0 36 13865.0 37 15156.0 38 19377.5 39 23599.0 40 23599.0 41 27668.5 42 31738.0 43 34570.0 44 37402.0 45 47821.5 46 58241.0 47 58241.0 48 63912.5 49 69584.0 50 77626.5 51 85669.0 52 86833.5 53 87998.0 54 87998.0 55 77262.0 56 66526.0 57 61156.5 58 55787.0 59 50791.0 60 45795.0 61 45795.0 62 41739.0 63 37683.0 64 31429.5 65 25176.0 66 21785.0 67 18394.0 68 18394.0 69 15891.0 70 13388.0 71 11527.0 72 9666.0 73 7840.0 74 6014.0 75 6014.0 76 4986.5 77 3959.0 78 3277.5 79 2596.0 80 2039.5 81 1483.0 82 1483.0 83 1190.5 84 898.0 85 666.0 86 434.0 87 329.0 88 224.0 89 224.0 90 182.0 91 140.0 92 84.0 93 28.0 94 19.0 95 10.0 96 10.0 97 5.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 740564.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.41237092255537 #Duplication Level Percentage of deduplicated Percentage of total 1 85.80550587002477 39.82436965637092 2 6.8336684927971 6.343335136989578 3 2.1931790792760664 3.0537192278084784 4 1.1184067831160203 2.0763164184113068 5 0.6856390240566733 1.5911066351748593 6 0.46656070937092553 1.299251322072837 7 0.3556273770150534 1.155385681256667 8 0.27104361848914077 1.0063821566007671 9 0.2025929661724738 0.846253790306781 >10 1.6536346480210387 15.801096525810424 >50 0.24041262030474264 7.998145448748444 >100 0.15852022854369865 13.681998214188647 >500 0.01199138260201367 3.5267528062745233 >1k 0.0032172002102963506 1.7958869799858335 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA 1444 0.194986523784575 No Hit GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA 1423 0.19215084719214007 No Hit GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA 1389 0.18755975175676917 No Hit TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA 1359 0.1835087851961478 No Hit CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA 1170 0.1579876958642332 No Hit GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG 1155 0.1559622125839225 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1124 0.15177621380461379 No Hit CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC 1068 0.14421440955812057 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1049 0.14164879740306036 No Hit TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT 1031 0.13921821746668755 No Hit GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC 1018 0.13746279862375163 No Hit CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA 991 0.1338169287191924 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 952 0.12855067219038463 No Hit GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT 922 0.12449970562976326 No Hit CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA 911 0.1230143512242021 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 752 0.10154422845290888 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.350322186873788E-4 0.0 10 2.700644373747576E-4 0.0 0.0 1.350322186873788E-4 0.0 11 2.700644373747576E-4 0.0 0.0 1.350322186873788E-4 0.0 12 2.700644373747576E-4 0.0 0.0 1.350322186873788E-4 0.0 13 2.700644373747576E-4 0.0 0.0 1.350322186873788E-4 0.0 14 2.700644373747576E-4 0.0 0.0 1.350322186873788E-4 0.0 15 4.0509665606213645E-4 0.0 0.0 2.700644373747576E-4 0.0 16 4.0509665606213645E-4 0.0 0.0 5.401288747495152E-4 0.0 17 4.0509665606213645E-4 0.0 0.0 8.101933121242729E-4 0.0 18 4.0509665606213645E-4 0.0 0.0 0.0010802577494990304 0.0 19 4.0509665606213645E-4 0.0 0.0 0.0016203866242485458 0.0 20 4.0509665606213645E-4 0.0 0.0 0.0021605154989980608 0.0 21 4.0509665606213645E-4 0.0 0.0 0.0031057410298097124 0.0 22 4.0509665606213645E-4 0.0 0.0 0.0037809021232466065 0.0 23 4.0509665606213645E-4 0.0 0.0 0.005266256528807773 0.0 24 4.0509665606213645E-4 0.0 0.0 0.0066165787156815615 0.0 25 4.0509665606213645E-4 0.0 0.0 0.007291739809118456 0.0 26 5.401288747495152E-4 0.0 0.0 0.008642061995992243 0.0 27 5.401288747495152E-4 0.0 0.0 0.025926185987976733 0.0 28 5.401288747495152E-4 0.0 0.0 0.1031646150771574 0.0 29 5.401288747495152E-4 0.0 0.0 0.2184821298361789 0.0 30 5.401288747495152E-4 0.0 0.0 0.3809258889170956 0.0 31 5.401288747495152E-4 0.0 0.0 0.8380099491738728 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTAGAGT 30 3.5982535E-4 30.833332 4 GGTATCA 1035 0.0 28.599035 1 CAGTCGG 275 0.0 21.527273 10 GCAGTCG 280 0.0 21.142859 9 TCGTGTA 70 5.0978797E-6 21.142859 13 AACGACC 105 9.804353E-10 21.142857 37 ATACGGC 90 9.46693E-8 20.555555 29 GCTAAAC 45 0.0038245423 20.555555 3 ATACACA 155 0.0 20.290323 37 TAGCAAT 65 6.897894E-5 19.923077 18 GTTTAGG 75 9.258472E-6 19.733334 1 AGTCGGT 300 0.0 19.116667 11 CGTTATT 50 0.007032576 18.5 10 TGTTACG 50 0.007032576 18.5 16 GATGCTA 60 9.2325883E-4 18.5 14 TTATTCA 50 0.007032576 18.5 4 GTATCAA 1620 0.0 18.271605 2 GTGATTC 290 0.0 17.862068 16 TCCTCGC 230 0.0 17.695652 21 GCCTAGT 105 4.7915637E-7 17.619047 1 >>END_MODULE