ERR1631936.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631936.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	62207
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	200	0.32150722587490155	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	177	0.2845338948992878	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	167	0.2684585336055428	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	166	0.26685099747616825	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	158	0.2539907084411722	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	146	0.23470027488867812	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	131	0.2105872329480605	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	130	0.20897969681868603	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	121	0.19451187165431544	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	120	0.1929043355249409	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	119	0.1912967993955664	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	109	0.17522143810182134	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT	94	0.15110839616120372	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	85	0.13664057099683316	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC	83	0.13342549873808413	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	83	0.13342549873808413	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	78	0.1253878180912116	No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTC	72	0.11574260131496454	No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA	71	0.11413506518559004	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA	71	0.11413506518559004	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT	70	0.11252752905621553	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	69	0.11091999292684102	No Hit
GAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC	68	0.10931245679746651	No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATC	67	0.10770492066809201	No Hit
CTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGC	67	0.10770492066809201	No Hit
ATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAG	67	0.10770492066809201	No Hit
CTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTAT	64	0.1028823122799685	No Hit
CCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTA	63	0.10127477615059399	No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC	63	0.10127477615059399	No Hit
CATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCA	63	0.10127477615059399	No Hit
GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTA	63	0.10127477615059399	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGGGAAG	20	0.0018285848	37.0	18
GGTATCA	105	0.0	29.952383	1
CAATGAG	45	3.928726E-6	28.777777	33
TCAATGA	45	3.928726E-6	28.777777	32
AATGAGC	45	3.928726E-6	28.777777	34
TCCGTGC	100	0.0	25.900002	8
TGAGCAA	50	8.911962E-6	25.900002	36
GCGGTAA	105	1.8189894E-12	24.666668	23
AACTCCG	105	1.8189894E-12	24.666668	5
CGTGCCA	105	1.8189894E-12	24.666668	10
GTAATAC	105	1.8189894E-12	24.666668	26
CTCCGTG	105	1.8189894E-12	24.666668	7
GGTAATA	105	1.8189894E-12	24.666668	25
GTGCCAG	105	1.8189894E-12	24.666668	11
TAATACG	90	1.3460522E-10	24.666666	27
ATACGGA	85	1.886292E-9	23.941175	29
GAGCAAA	55	1.8654322E-5	23.545454	37
TAACTCC	110	1.8189894E-12	23.545454	4
CTAACTC	110	1.8189894E-12	23.545454	3
CGCGGTA	110	1.8189894E-12	23.545454	22

Summary

Basic Statistics

Per base sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content