ERR1631918.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631918.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	60179
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	215	0.357267485335416	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	177	0.2941225344389239	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	145	0.24094783894714106	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	141	0.2343010020106682	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	108	0.17946459728476713	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	103	0.17115605111417603	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	101	0.16783263264593962	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	101	0.16783263264593962	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	100	0.16617092341182138	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	100	0.16617092341182138	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	91	0.15121554030475748	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGCTGTCTC	91	0.15121554030475748	No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC	89	0.14789212183652103	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	88	0.14623041260240283	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	84	0.13958357566592997	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTCTT	82	0.13626015719769355	No Hit
TTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC	81	0.13459844796357534	No Hit
CTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGC	77	0.12795161102710248	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	77	0.12795161102710248	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	76	0.12628990179298424	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA	74	0.12296648332474783	No Hit
CCGTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAAT	70	0.11631964638827497	No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA	68	0.11299622792003855	No Hit
CATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCA	67	0.11133451868592034	No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG	66	0.10967280945180212	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT	66	0.10967280945180212	No Hit
AGTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCAC	66	0.10967280945180212	No Hit
GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTA	65	0.10801110021768391	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG	64	0.10634939098356569	No Hit
GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA	62	0.10302597251532926	No Hit
GTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTC	62	0.10302597251532926	No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGA	61	0.10136426328121106	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAATACG	65	1.8189894E-12	34.153847	27
GCGGTAA	75	0.0	32.066666	23
CGGTAAT	75	0.0	32.066666	24
GTAATAC	70	5.456968E-12	31.714285	26
GGTAATA	70	5.456968E-12	31.714285	25
AGCCGCG	85	0.0	30.470589	19
CGCGGTA	80	1.8189894E-12	30.062502	22
TATACAC	25	0.0054555438	29.599998	37
GGTATCA	120	0.0	29.291666	1
TCCGTGC	90	0.0	28.777779	8
CCGCGGT	90	0.0	28.777779	21
GTGCCAG	90	0.0	28.777779	11
GTATCAA	125	0.0	28.119999	2
ATACGGA	80	3.092282E-11	27.750002	29
GGAGGGT	60	4.181493E-8	27.749998	33
AACTCCG	95	0.0	27.263159	5
CGTGCCA	95	0.0	27.263159	10
GCCAGCA	105	0.0	26.42857	13
CGGGCCC	35	8.771649E-4	26.42857	16
CAGCCGC	105	0.0	26.42857	18

Summary

Basic Statistics

Per base sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content