##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631734.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 628921 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.55868066100512 34.0 31.0 34.0 31.0 34.0 2 32.72976574164323 34.0 31.0 34.0 31.0 34.0 3 32.821146058089965 34.0 31.0 34.0 31.0 34.0 4 36.26813701561881 37.0 37.0 37.0 35.0 37.0 5 36.1708179564683 37.0 35.0 37.0 35.0 37.0 6 36.2199115628195 37.0 36.0 37.0 35.0 37.0 7 36.210725989432696 37.0 36.0 37.0 35.0 37.0 8 36.18620621667904 37.0 36.0 37.0 35.0 37.0 9 38.01122239518159 39.0 38.0 39.0 35.0 39.0 10 37.92411447542696 39.0 38.0 39.0 35.0 39.0 11 38.009586259641516 39.0 38.0 39.0 35.0 39.0 12 37.944884969654375 39.0 38.0 39.0 35.0 39.0 13 37.99872957016859 39.0 38.0 39.0 35.0 39.0 14 39.38453637261278 40.0 39.0 41.0 37.0 41.0 15 39.380927016270725 40.0 39.0 41.0 37.0 41.0 16 39.32826380419798 40.0 39.0 41.0 36.0 41.0 17 39.28815542810623 40.0 39.0 41.0 36.0 41.0 18 39.30731840724034 40.0 39.0 41.0 36.0 41.0 19 39.34126066707901 40.0 39.0 41.0 36.0 41.0 20 39.32151414883587 40.0 39.0 41.0 36.0 41.0 21 39.291192375512985 40.0 39.0 41.0 36.0 41.0 22 39.266591511493495 40.0 39.0 41.0 36.0 41.0 23 39.2005609607566 40.0 39.0 41.0 36.0 41.0 24 39.20925839652357 40.0 39.0 41.0 36.0 41.0 25 39.152292577287135 40.0 39.0 41.0 36.0 41.0 26 39.093137293873156 40.0 39.0 41.0 36.0 41.0 27 38.997195196217014 40.0 39.0 41.0 35.0 41.0 28 38.981174106127796 40.0 39.0 41.0 35.0 41.0 29 38.955126319521845 40.0 38.0 41.0 35.0 41.0 30 38.90888839774789 40.0 38.0 41.0 35.0 41.0 31 38.83475667055163 40.0 38.0 41.0 35.0 41.0 32 38.796034796103164 40.0 38.0 41.0 35.0 41.0 33 38.73708462589101 40.0 38.0 41.0 35.0 41.0 34 38.69831664072276 40.0 38.0 41.0 35.0 41.0 35 38.63374414274607 40.0 38.0 41.0 35.0 41.0 36 38.60350823076348 40.0 38.0 41.0 35.0 41.0 37 38.562191435808316 40.0 38.0 41.0 35.0 41.0 38 38.52279062076159 40.0 38.0 41.0 35.0 41.0 39 38.46506794971069 40.0 38.0 41.0 34.0 41.0 40 38.142485304195596 40.0 38.0 41.0 34.0 41.0 41 38.23006228127221 40.0 37.0 41.0 34.0 41.0 42 38.22575331400923 40.0 37.0 41.0 34.0 41.0 43 37.75588507936609 40.0 37.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 1.0 13 0.0 14 0.0 15 0.0 16 0.0 17 1.0 18 11.0 19 25.0 20 32.0 21 74.0 22 147.0 23 201.0 24 359.0 25 582.0 26 936.0 27 1455.0 28 2136.0 29 3119.0 30 4529.0 31 5941.0 32 8123.0 33 11284.0 34 16456.0 35 24552.0 36 37737.0 37 66673.0 38 156199.0 39 288347.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 42.86309409289879 16.604629198261787 12.712089435716093 27.82018727312333 2 20.27043142143449 19.308625407642612 33.352519632831466 27.06842353809143 3 20.64361024675595 20.3081150096753 29.250732603935948 29.7975421396328 4 15.722006420520223 15.514985188918798 33.67624868624199 35.086759704318986 5 16.789231079897156 33.02879057942095 33.848130369315065 16.333847971366833 6 35.05448220046715 33.61042165868209 15.168518780578163 16.166577360272594 7 31.023133271110364 27.655619704223582 20.207784443515166 21.11346258115089 8 27.609508984435248 31.596337218823983 19.963238626154954 20.83091517058581 9 28.412789523644467 13.161589452411352 17.7441999869618 40.681421036982385 10 18.857535366127067 23.851008314239785 30.777951443822037 26.513504875811112 11 38.7349126519865 19.790879935635793 19.118935446582324 22.35527196579539 12 23.263812148107633 23.799491510062474 26.777607998460855 26.159088343369042 13 33.56605996619607 17.96282839975132 21.83549285204342 26.635618782009185 14 24.347414063133527 19.619952267454895 23.34522141890635 32.68741225050523 15 28.810295728716323 24.42516627684558 20.545823720308274 26.218714274129816 16 26.247652725859048 24.051033436631947 22.284674863774622 27.41663897373438 17 26.631802722440494 23.90443314820144 22.29914408963924 27.164620039718816 18 26.290106388560723 22.2403131712886 24.020663962564456 27.448916477586216 19 27.92035883680144 22.3121822931656 23.635877956054895 26.13158091397807 20 28.951807937721906 21.484256369241926 23.391809146140773 26.172126546895395 21 27.074306629926493 22.78807672187763 22.38532343489882 27.752293213297058 22 28.017827358285064 23.224379532564505 21.77332288157018 26.984470227580253 23 27.306927261134543 22.863125893395196 22.984921794629216 26.84502505084104 24 27.497412234604983 22.46991275533811 22.921638806781775 27.111036203275134 25 27.566260309323425 22.417918943714714 23.326459126026958 26.689361620934903 26 27.370687256428074 23.008931169415554 22.814153128930343 26.806228445226033 27 27.219952903464822 22.170034074231896 23.43410380636042 27.175909215942863 28 26.148435177073114 22.801114925403986 23.01704029599902 28.03340960152388 29 27.074306629926493 23.17922282766834 23.01227022153816 26.734200320867007 30 26.553255496318297 22.827986344866844 23.819048815352005 26.79970934346285 31 27.138543632666106 22.72988181345511 23.198462127993817 26.93311242588497 32 25.297135888291216 22.731630840757425 23.477352481472234 28.493880789479125 33 25.807533855603488 22.344141792053374 24.823785499291645 27.024538853051496 34 26.142711087720077 22.01707368652025 24.587507810996932 27.252707414762746 35 25.890374148740463 23.304198778542933 24.770042660365927 26.035384412350677 36 25.836313304850687 22.470866770230284 25.087570616977327 26.605249307941698 37 26.071000968325116 22.021207751052994 24.914893921494112 26.992897359127777 38 25.473628643343122 21.540861252844156 25.901186317518416 27.084323786294306 39 24.932861201963362 20.78909751781225 26.809567497348635 27.46847378287575 40 24.614538232941815 21.694139645519865 27.462749693522714 26.2285724280156 41 23.235509706306516 20.60703967588934 28.643184120104117 27.514266497700028 42 22.34048473496671 21.066397846470384 29.078850920862877 27.514266497700028 43 21.691595605807407 21.243367608968374 29.297956341098484 27.76708044412573 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 9.0 1 7.5 2 6.0 3 22.0 4 38.0 5 38.0 6 42.5 7 47.0 8 43.5 9 40.0 10 73.0 11 106.0 12 106.0 13 246.0 14 386.0 15 692.5 16 999.0 17 978.0 18 957.0 19 957.0 20 1171.5 21 1386.0 22 1263.0 23 1140.0 24 1408.0 25 1676.0 26 1676.0 27 2033.5 28 2391.0 29 3341.5 30 4292.0 31 5439.5 32 6587.0 33 6587.0 34 8194.5 35 9802.0 36 11396.0 37 12990.0 38 16089.5 39 19189.0 40 19189.0 41 21816.5 42 24444.0 43 27503.0 44 30562.0 45 37812.5 46 45063.0 47 45063.0 48 49210.0 49 53357.0 50 59952.0 51 66547.0 52 68595.5 53 70644.0 54 70644.0 55 65670.0 56 60696.0 57 57086.0 58 53476.0 59 48658.0 60 43840.0 61 43840.0 62 40193.5 63 36547.0 64 31105.0 65 25663.0 66 21925.0 67 18187.0 68 18187.0 69 15560.0 70 12933.0 71 11165.0 72 9397.0 73 7683.0 74 5969.0 75 5969.0 76 4801.5 77 3634.0 78 3029.5 79 2425.0 80 1932.5 81 1440.0 82 1440.0 83 1181.5 84 923.0 85 730.0 86 537.0 87 440.0 88 343.0 89 343.0 90 257.5 91 172.0 92 118.5 93 65.0 94 40.5 95 16.0 96 16.0 97 8.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 628921.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.950891864827135 #Duplication Level Percentage of deduplicated Percentage of total 1 86.74336184717284 45.93138373161219 2 6.321572366801254 6.69465789620345 3 2.0887479131767104 3.3180319465050996 4 1.1039620565272137 2.3382310191217863 5 0.6455612987576538 1.709152326131694 6 0.45409957760300873 1.4426986577712357 7 0.33594698658422967 1.2452084791255253 8 0.24631670246920068 1.0434151261557953 9 0.20341992763228595 0.969413993208732 >10 1.5543221573124049 16.582422220651967 >50 0.18963295671674907 7.015294623226804 >100 0.10883544410132966 10.094393212686539 >500 0.003617798695889037 1.2890773044524741 >1k 6.029664493148395E-4 0.32661946314671975 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA 1038 0.16504457634583677 No Hit TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA 1008 0.16027450188497444 No Hit CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA 832 0.1322900650479154 No Hit CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC 789 0.1254529583206794 No Hit GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG 755 0.12004687393170207 No Hit GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC 719 0.11432278457866728 No Hit TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT 708 0.11257375727635108 No Hit GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA 690 0.10971171259983369 No Hit GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT 653 0.10382862076477013 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 636 0.10112557857028148 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 3.1800496405748894E-4 0.0 0.0 0.0 0.0 9 3.1800496405748894E-4 0.0 0.0 0.0 0.0 10 3.1800496405748894E-4 0.0 0.0 0.0 0.0 11 3.1800496405748894E-4 0.0 0.0 0.0 0.0 12 3.1800496405748894E-4 0.0 0.0 0.0 0.0 13 3.1800496405748894E-4 0.0 0.0 0.0 0.0 14 3.1800496405748894E-4 0.0 0.0 0.0 0.0 15 3.1800496405748894E-4 0.0 0.0 1.5900248202874447E-4 0.0 16 3.1800496405748894E-4 0.0 0.0 7.950124101437224E-4 0.0 17 3.1800496405748894E-4 0.0 0.0 0.0014310223382587002 0.0 18 3.1800496405748894E-4 0.0 0.0 0.0014310223382587002 1.5900248202874447E-4 19 3.1800496405748894E-4 0.0 0.0 0.0019080297843449337 1.5900248202874447E-4 20 3.1800496405748894E-4 0.0 0.0 0.0028620446765174005 1.5900248202874447E-4 21 3.1800496405748894E-4 0.0 0.0 0.007791121619408479 1.5900248202874447E-4 22 3.1800496405748894E-4 0.0 0.0 0.012561196080270813 1.5900248202874447E-4 23 3.1800496405748894E-4 0.0 0.0 0.015105235792730725 1.5900248202874447E-4 24 3.1800496405748894E-4 0.0 0.0 0.017967280469248125 1.5900248202874447E-4 25 3.1800496405748894E-4 0.0 0.0 0.01955730528953557 1.5900248202874447E-4 26 3.1800496405748894E-4 0.0 0.0 0.02210134500199548 1.5900248202874447E-4 27 4.7700744608623343E-4 0.0 0.0 0.041817652773559796 1.5900248202874447E-4 28 4.7700744608623343E-4 0.0 0.0 0.11543580195286848 1.5900248202874447E-4 29 4.7700744608623343E-4 0.0 0.0 0.24422781239615152 1.5900248202874447E-4 30 4.7700744608623343E-4 0.0 0.0 0.4218335848222591 1.5900248202874447E-4 31 4.7700744608623343E-4 0.0 0.0 0.9397046687898798 1.5900248202874447E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATATAAC 40 5.935919E-5 27.75 3 GGTATCA 790 0.0 27.632914 1 TGTTACG 65 9.377618E-8 25.615385 16 AAACACG 50 2.7002176E-4 22.199999 15 GACCGTT 80 6.949813E-7 20.8125 7 AGTATTA 55 5.139536E-4 20.181818 15 CGAACTA 65 6.8957816E-5 19.923077 24 GTACTAT 75 9.254836E-6 19.733334 1 CGTTATT 95 1.6731065E-7 19.473684 10 TATTAGA 105 2.2544555E-8 19.38095 2 CTTATAC 725 0.0 18.88276 37 TACCTTA 70 1.2180838E-4 18.5 31 AACGATT 60 9.2304783E-4 18.5 22 ATAACGC 80 1.6147746E-5 18.5 35 GTGTTAT 50 0.0070314277 18.499998 1 TTCGTCT 50 0.0070314277 18.499998 22 TTGTTAC 100 2.8697832E-7 18.499998 15 ATCTAAG 215 0.0 18.069767 32 TACCCTC 145 1.546141E-10 17.86207 5 CCTCTAG 105 4.788726E-7 17.619047 1 >>END_MODULE