ERR1631729.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631729.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	81160
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	216	0.2661409561360276	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	196	0.24149827501232135	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	180	0.22178413011335632	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	154	0.18974864465253818	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	140	0.17249876786594381	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	135	0.16633809758501725	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	133	0.16387382947264661	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	131	0.161409561360276	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	128	0.15771315919172008	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	120	0.14785608674223755	No Hit
CATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCA	105	0.12937407589945785	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	96	0.11828486939379004	No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA	94	0.11582060128141941	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	92	0.11335633316904879	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	89	0.10965993100049286	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	88	0.10842779694430753	No Hit
GTGCGATTGCCTCGGTGATAACGACATTGGGGCCACTAAAGAT	87	0.10719566288812223	No Hit
CCGTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAAT	85	0.1047313947757516	No Hit
CTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA	83	0.10226712666338098	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	120	0.0	33.916664	1
AGAGTCA	25	0.005466664	29.6	6
GCTCAAT	25	0.005466664	29.6	34
GGTACTT	35	8.798263E-4	26.42857	2
TACTTAG	35	8.798263E-4	26.42857	4
GGGTACT	35	8.798263E-4	26.42857	1
CTTATAC	70	6.4010237E-9	26.42857	37
GTACTTA	35	8.798263E-4	26.42857	3
GTATCAA	165	0.0	24.666668	2
CTCAATG	40	0.0019158456	23.125002	35
CCCAACA	40	0.0019158456	23.125002	2
TTCATAT	40	0.0019158456	23.125002	11
TTAGATG	45	0.003795705	20.555557	7
TGGTTCA	45	0.003795705	20.555557	5
GTTCGCC	45	0.003795705	20.555557	28
CTCATTA	45	0.003795705	20.555557	34
GTACTGG	45	0.003795705	20.555557	1
CTTATTG	55	5.0867087E-4	20.181818	28
GTGTTAG	60	9.136375E-4	18.5	1
ACCGGCG	50	0.006980059	18.5	7