FastQCFastQC Report
Fri 10 Feb 2017
ERR1631708.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631708.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7664
Sequences flagged as poor quality0
Sequence length43
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC290.37839248434238No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA180.23486430062630478No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC170.22181628392484343No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT160.20876826722338201No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC160.20876826722338201No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA160.20876826722338201No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA150.19572025052192066No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT150.19572025052192066No Hit
GTGCAGGAGGCGGCGGGTGTGGGGCTGCCTGCAGGCTGCGTCT150.19572025052192066No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA140.18267223382045927No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATC130.16962421711899792No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA130.16962421711899792No Hit
AGGTAGAGAGCTTCCACCAGGTGTGAGCCGCACAGGTGTTGGT120.15657620041753653No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA110.14352818371607515No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG110.14352818371607515No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA110.14352818371607515No Hit
GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA110.14352818371607515No Hit
CTGCAGAAGCGTGGCATTGTGGAACAATGCTGTACCAGCATCT100.1304801670146138No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG100.1304801670146138No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA90.11743215031315239No Hit
GTGTGGGGCTGCCTGCAGGCTGCGTCTAGTTGCAGTAGTTCTC90.11743215031315239No Hit
GCCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCA90.11743215031315239No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT90.11743215031315239No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA90.11743215031315239No Hit
CATCAGAAGAGGCCATCAAGCAGATCACTGTCCTTCTGCCATG90.11743215031315239No Hit
ATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAG90.11743215031315239No Hit
CATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCA90.11743215031315239No Hit
GGTGTTGGTTCACAAAGGCTGCGGCTGGGTCAGGTCCCCAGAG90.11743215031315239No Hit
CTTCTACACACCCAAGACCCGCCGGGAGGCAGAGGACCTGCAG90.11743215031315239No Hit
GGTCTTGGGTGTGTAGAAGAAGCCTCGTTCCCCGCACACTAGG80.10438413361169101No Hit
CCGTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAAT80.10438413361169101No Hit
CTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA80.10438413361169101No Hit
TCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTT80.10438413361169101TruSeq Adapter, Index 1 (95% over 21bp)

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)