ERR1631632.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631632.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	20015
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA	69	0.3447414439170622	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA	58	0.28978266300274796	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC	57	0.28478641019235573	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA	52	0.2598051461403947	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT	51	0.2548088933300025	No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA	49	0.24481638770921807	No Hit
TCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACT	45	0.22483137646764928	No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG	45	0.22483137646764928	No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC	34	0.169872595553335	No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA	34	0.169872595553335	No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT	34	0.169872595553335	No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA	34	0.169872595553335	No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	33	0.1648763427429428	No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA	32	0.1598800899325506	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	31	0.15488383712215836	No Hit
GTGCGATTGCCTCGGTGATAACGACATTGGGGCCACTAAAGAT	30	0.1498875843117662	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	30	0.1498875843117662	No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT	29	0.14489133150137398	No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA	29	0.14489133150137398	No Hit
CCGTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAAT	28	0.13989507869098175	No Hit
CCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTA	28	0.13989507869098175	No Hit
TTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACTTCA	27	0.13489882588058955	No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG	27	0.13489882588058955	No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGCTG	27	0.13489882588058955	No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA	27	0.13489882588058955	No Hit
AGCGTACACGGTGGATGCCCTGGCAGTCAGAGGCGATGAAGGA	26	0.12990257307019734	No Hit
CTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA	26	0.12990257307019734	No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCTG	26	0.12990257307019734	No Hit
ATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAG	26	0.12990257307019734	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	26	0.12990257307019734	No Hit
TTTCACATCTGACTTAACAAACCGCCTGCGTGCGCTTTACGCC	23	0.11491381463902073	No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT	23	0.11491381463902073	No Hit
ATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCAC	23	0.11491381463902073	No Hit
GATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCAC	23	0.11491381463902073	No Hit
CTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGC	23	0.11491381463902073	No Hit
CTCCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCCTGTCTC	22	0.10991756182862852	No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG	22	0.10991756182862852	No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCTG	21	0.10492130901823633	No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAC	21	0.10492130901823633	No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC	21	0.10492130901823633	No Hit
GTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTTTC	21	0.10492130901823633	No Hit
CTTTACGCCCAGTAATTCCGATTAACGCTTGCACCCTCCGTAT	21	0.10492130901823633	No Hit

Adapter Content

Adapter graph

Kmer Content

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGTGCC	40	3.5215635E-8	37.0	9
GCGGTAA	35	5.2718497E-7	37.0	23
ATACGGA	20	0.0017990372	37.0	29
CGCGGTA	35	5.2718497E-7	37.0	22
CGTGCCA	40	3.5215635E-8	37.0	10
TAATACG	30	7.910854E-6	37.0	27
TCCGTGC	40	3.5215635E-8	37.0	8
AATACGG	30	7.910854E-6	37.0	28
AGCCGCG	40	3.5215635E-8	37.0	19
GTAATAC	35	5.2718497E-7	37.0	26
CGGTAAT	35	5.2718497E-7	37.0	24
CAGCAGC	45	9.926589E-8	32.88889	15
GCCAGCA	45	9.926589E-8	32.88889	13
AACTCCG	45	9.926589E-8	32.88889	5
CTCCGTG	45	9.926589E-8	32.88889	7
CCGCGGT	45	9.926589E-8	32.88889	21
GTGCCAG	45	9.926589E-8	32.88889	11
GGTAATA	40	1.4986217E-6	32.375	25
CGGAGGG	25	0.00536978	29.599998	32
CCAGCAG	50	2.502111E-7	29.599998	14

Summary

Basic Statistics

Per base sequence quality

Per sequence quality scores

Per base sequence content

Per sequence GC content

Per base N content

Sequence Length Distribution

Sequence Duplication Levels

Overrepresented sequences

Adapter Content

Kmer Content