FastQCFastQC Report
Fri 10 Feb 2017
ERR1631616.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631616.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4586
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAA170.3706934147405146No Hit
TCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGACA150.3270824247710423No Hit
GAGTTAGCCGGTGCTTCTTCTGCGGGTAACGTCAATGAGCAAA130.28347143480157No Hit
GGATACCACGTGTCCCGCCCTACTCATCGAGCTCACAGCATGT120.26166593981683384No Hit
ATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGA120.26166593981683384No Hit
CGCTTGCACCCTCCGTATTACCGCGGCTGCTGGCACGGAGTTA110.2398604448320977No Hit
ACCATGAAGTGCGATTGCCTCGGTGATAACGACATTGGGGCCA100.2180549498473615No Hit
GTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAAC90.19624945486262538No Hit
GATTAGCACGTCCTTCATCGCCTCTGACTGCCAGGGCATCCAC90.19624945486262538No Hit
GGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGCTGTCTCTT90.19624945486262538No Hit
AATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAA90.19624945486262538No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT90.19624945486262538No Hit
GTTAATACCTTTGCTCATTGACGTTACCCGCAGAAGAAGCACC90.19624945486262538No Hit
ACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG80.17444395987788924No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT80.17444395987788924No Hit
GTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCG80.17444395987788924No Hit
CCGTCATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATA80.17444395987788924No Hit
ACCCTGTATCGCGCGCCTTTCCAGACGCTTCCACTAACACACA80.17444395987788924No Hit
CATCTTTAGTGACCATGAAGTGCGATTGCCTCGGTGATAACGA80.17444395987788924No Hit
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA70.15263846489315308No Hit
GAAGAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATAC70.15263846489315308No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAT70.15263846489315308No Hit
GTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGAC70.15263846489315308No Hit
GGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACC70.15263846489315308No Hit
GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCTTC70.15263846489315308No Hit
TCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTT70.15263846489315308TruSeq Adapter, Index 10 (95% over 21bp)
TTAGTGGCCCCAATGTCGTTATCACCGAGGCAATCGCACTTCA70.15263846489315308No Hit
GAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCA70.15263846489315308No Hit
CTCCAAGGCTAAATACTCCTGACTGACCGATAGTGAACCAGTA70.15263846489315308No Hit
GTTAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGG70.15263846489315308No Hit
CACACACACTGATTCAGGCTCTGGGCTGCTCCCCGTTCGCTCG70.15263846489315308No Hit
GGTATTAACTTTACTCCCTTCCTCCCCGCTGAAAGTACTTTAC60.13083296990841692No Hit
CCCCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCAC60.13083296990841692No Hit
CCGTTATAACCGGCGATTTCCGAATGGGGAAACCCAGTGTGTT60.13083296990841692No Hit
GATATGAACCGTTATAACCGGCGATTTCCGAATGGGGAAACCC60.13083296990841692No Hit
TAATGATAGTGTGTCGAAACACACTGGGTTTCCCCATTCGGAA60.13083296990841692No Hit
GTAATACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTA50.10902747492368076No Hit
CCGCTACACCATTGCCGCCCTGCTGAGCCCCTACTCCTATTCC50.10902747492368076No Hit
GTGGATGCCCTGGCAGTCAGAGGCGATGAAGGACGTGCTAATC50.10902747492368076No Hit
CCAATGTCGTTATCACCGAGGCAATCGCACTTCATGGTCACTA50.10902747492368076No Hit
GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTCTGT50.10902747492368076No Hit
CACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATC50.10902747492368076No Hit
CCGTCATCTTTAGTGGCCCCAATGTCGTTATCACCGAGGCAAT50.10902747492368076No Hit
CGTTATCACCGAGGCAATCGCACTTCATGGTCACTAAAGATGA50.10902747492368076No Hit
CCGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTCT50.10902747492368076No Hit
GTGGTATCCTGTCTGAATATGGGGGGACCATCCTCCAAGGCTA50.10902747492368076No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)