ERR1631607.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631607.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	24509
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	75	0.30601003712921787	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	54	0.22032722673303684	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	43	0.17544575462075157	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA	39	0.15912521930719328	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	36	0.14688481782202456	No Hit
CTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGT	34	0.13872455016524543	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGACTGTCTCT	29	0.11832388102329756	No Hit
TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT	29	0.11832388102329756	No Hit
TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT	26	0.10608347953812884	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCCGGGG	20	0.0018070043	37.0	8
ACATCTC	20	0.0018070043	37.0	8
CCGAGCC	40	0.0018780575	23.125	14
GGTATCA	130	2.7284841E-11	19.923077	1
GTATCAA	135	4.5474735E-11	19.185184	2
AACGCAG	155	6.1263563E-9	15.5161295	7
CAACGCA	170	1.2314558E-9	15.235293	6
TCAACGC	175	1.8571882E-9	14.8	5
CATGGGA	75	0.0039540217	14.8	18
ATCAACG	175	1.8571882E-9	14.8	4
TATCAAC	180	2.764864E-9	14.388888	3
GAGTACA	155	1.05432264E-7	14.322581	13
AGTACAT	160	1.554672E-7	13.875	14
ACATGGG	165	2.2635322E-7	13.454545	17
ACGCAGA	180	4.39868E-8	13.361111	8
TCTTATA	195	8.536517E-9	13.282052	37
CGCAGAG	185	6.299342E-8	13.000001	9
TACATGG	175	4.6326568E-7	12.685715	16
CAGAGTA	195	1.2535565E-7	12.333334	11
AGAGTAC	195	1.2535565E-7	12.333334	12