##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631607.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 24509 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.96927659227222 34.0 33.0 34.0 31.0 34.0 2 33.13191072667183 34.0 33.0 34.0 31.0 34.0 3 33.166959076257704 34.0 33.0 34.0 31.0 34.0 4 36.456036557999106 37.0 37.0 37.0 35.0 37.0 5 36.47080664245787 37.0 37.0 37.0 35.0 37.0 6 36.535272756946426 37.0 37.0 37.0 35.0 37.0 7 36.50813986698764 37.0 37.0 37.0 35.0 37.0 8 36.51454567709821 37.0 37.0 37.0 35.0 37.0 9 38.35901097556 39.0 39.0 39.0 37.0 39.0 10 38.320412909543435 39.0 39.0 39.0 37.0 39.0 11 38.38920396589008 39.0 39.0 39.0 37.0 39.0 12 38.339711942551716 39.0 39.0 39.0 37.0 39.0 13 38.35607327920356 39.0 39.0 39.0 37.0 39.0 14 39.85756252805092 41.0 40.0 41.0 38.0 41.0 15 39.863152311395815 41.0 40.0 41.0 38.0 41.0 16 39.79587090456567 41.0 40.0 41.0 38.0 41.0 17 39.75857848137419 41.0 40.0 41.0 38.0 41.0 18 39.77665347423395 41.0 40.0 41.0 38.0 41.0 19 39.833204129095435 41.0 40.0 41.0 38.0 41.0 20 39.817373209841286 41.0 40.0 41.0 38.0 41.0 21 39.796278917948506 41.0 40.0 41.0 38.0 41.0 22 39.711412134318 41.0 40.0 41.0 37.0 41.0 23 39.66563303276347 41.0 40.0 41.0 37.0 41.0 24 39.619649924517525 41.0 40.0 41.0 37.0 41.0 25 39.59153780243992 41.0 40.0 41.0 37.0 41.0 26 39.489126443347345 41.0 39.0 41.0 37.0 41.0 27 39.45016116528622 41.0 39.0 41.0 36.0 41.0 28 39.35366600024481 41.0 39.0 41.0 36.0 41.0 29 39.29409604635032 41.0 39.0 41.0 36.0 41.0 30 39.19250071402342 41.0 39.0 41.0 35.0 41.0 31 39.106899506303805 41.0 39.0 41.0 35.0 41.0 32 39.02701048594394 40.0 39.0 41.0 35.0 41.0 33 38.94010363539924 40.0 39.0 41.0 35.0 41.0 34 38.847362193479945 40.0 38.0 41.0 35.0 41.0 35 38.77583744746828 40.0 38.0 41.0 35.0 41.0 36 38.70467991350116 40.0 38.0 41.0 35.0 41.0 37 38.65665673834102 40.0 38.0 41.0 35.0 41.0 38 38.5682810396181 40.0 38.0 41.0 35.0 41.0 39 38.429026072055166 40.0 38.0 41.0 35.0 41.0 40 38.3286139785385 40.0 37.0 41.0 35.0 41.0 41 38.23889183565221 40.0 37.0 41.0 35.0 41.0 42 38.12309763760251 40.0 37.0 41.0 34.0 41.0 43 37.24289036680403 40.0 36.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 18 1.0 19 0.0 20 1.0 21 2.0 22 4.0 23 5.0 24 21.0 25 23.0 26 26.0 27 61.0 28 57.0 29 108.0 30 156.0 31 170.0 32 240.0 33 328.0 34 432.0 35 738.0 36 1154.0 37 2265.0 38 5122.0 39 13595.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.139254967562934 16.691827491941737 14.231506793422824 25.937410747072505 2 21.767513974458364 18.495246644089928 32.29833938553185 27.43889999591987 3 20.800522257130034 20.784201721816476 28.61805867232445 29.79721734872904 4 15.50858868170876 16.74894936553919 31.221184054836996 36.52127789791505 5 17.087600473295524 33.57134113998939 31.35582847117385 17.98522991554123 6 34.489371251377044 31.13958137826921 15.949243135174834 18.421804235178914 7 30.494920233383656 29.20559794361255 18.352441960096293 21.947039862907502 8 29.821698151699376 30.34803541556163 18.238198212901384 21.59206821983761 9 27.60210534905545 13.472601901342365 17.956668978742503 40.968623770859686 10 21.926639193765553 22.979313721490065 26.753437512750416 28.340609571993962 11 37.12105757068832 21.277897915051614 17.360969439797625 24.240075074462442 12 24.223754539148885 25.998612754498346 23.628055000204007 26.14957770614876 13 32.71451303602758 17.173283283691703 23.179240279081153 26.93296340119956 14 24.966338895915786 19.172548859602596 22.049043208617242 33.812069035864376 15 30.229711534538335 22.901791178750663 19.384715818678853 27.483781468032152 16 26.53311028601738 23.78310008568281 22.26529030152189 27.41849932677792 17 25.243787996246276 25.468195356807705 22.15104655432698 27.136970092619038 18 25.87620873964666 21.718552368517688 24.329838018687013 28.075400873148638 19 26.524950018360606 24.42776123056836 23.33836549838835 25.708923252682688 20 27.455220531233426 21.069811089803743 25.02346076951324 26.451507609449592 21 30.92333428536456 21.363580725447797 21.996001468848178 25.717083520339468 22 29.19335754212738 22.020482271818516 21.52270594475499 27.26345424129911 23 27.60210534905545 22.224488963237995 22.326492308947735 27.846913378758824 24 26.586152025786447 23.248602554163778 22.987473989146846 27.177771430902936 25 26.337263862254684 23.00787465828879 23.060916398057856 27.59394508139867 26 28.61805867232445 22.122485617528255 22.95075278469134 26.308702925455957 27 28.38549104410625 22.089844546901137 21.755273572973195 27.76939083601942 28 25.684442449712353 22.044963074788853 24.91737728997511 27.353217185523686 29 25.733404055653025 22.375453914888407 25.741564323309806 26.14957770614876 30 25.65180137908523 22.306091639805786 26.09245583255131 25.949651148557674 31 25.933330613244117 22.575380472479498 23.885103431392547 27.606185482883838 32 24.66440899261496 22.053123342445634 26.129177037006812 27.1532906279326 33 24.578726182218777 21.163654167856706 26.806479252519484 27.451140397405034 34 25.627320576114897 20.812762658615203 25.929250479415728 27.630666285854176 35 24.872495817862823 20.76788118650292 26.4066261373373 27.952996858296952 36 23.375086702843852 20.310906197723284 27.243053572157166 29.070953527275694 37 23.248602554163778 18.980782569668285 28.785344159288424 28.985270716879512 38 22.689624219674407 17.70370068138235 30.666285854176017 28.94038924476723 39 21.996001468848178 17.96890938022767 32.50234607695132 27.532743073972828 40 21.171814435513483 18.274919417356887 32.384022195928026 28.1692439512016 41 18.968542168183117 19.131747521318697 34.08951813619487 27.810192174303317 42 18.82573748418948 19.976335223795342 32.90627932596189 28.291647966053286 43 17.467052919335753 20.857644130727486 32.9838018687013 28.691501081235465 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 0.0 1 1.5 2 3.0 3 7.0 4 11.0 5 11.0 6 13.0 7 15.0 8 17.0 9 19.0 10 30.5 11 42.0 12 42.0 13 55.5 14 69.0 15 115.0 16 161.0 17 137.5 18 114.0 19 114.0 20 125.5 21 137.0 22 103.0 23 69.0 24 65.5 25 62.0 26 62.0 27 67.0 28 72.0 29 110.0 30 148.0 31 170.5 32 193.0 33 193.0 34 267.0 35 341.0 36 443.5 37 546.0 38 664.5 39 783.0 40 783.0 41 950.0 42 1117.0 43 1303.0 44 1489.0 45 1730.0 46 1971.0 47 1971.0 48 2106.5 49 2242.0 50 2191.5 51 2141.0 52 2086.0 53 2031.0 54 2031.0 55 1832.0 56 1633.0 57 1616.0 58 1599.0 59 1541.5 60 1484.0 61 1484.0 62 1449.5 63 1415.0 64 1339.5 65 1264.0 66 1130.0 67 996.0 68 996.0 69 899.5 70 803.0 71 697.5 72 592.0 73 489.5 74 387.0 75 387.0 76 326.0 77 265.0 78 214.0 79 163.0 80 113.0 81 63.0 82 63.0 83 50.5 84 38.0 85 26.0 86 14.0 87 11.5 88 9.0 89 9.0 90 7.5 91 6.0 92 3.5 93 1.0 94 1.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 24509.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 80.52144110326819 #Duplication Level Percentage of deduplicated Percentage of total 1 89.56675956422599 72.12044555061406 2 6.252850266024828 10.069770288465461 3 1.7532303014948063 4.235178913868374 4 0.9171522675449708 2.95401689175405 5 0.5016468203699012 2.0196662450528375 6 0.25335697998479856 1.2240401485168715 7 0.19255130478844693 1.085315598351626 8 0.10640993159361539 0.685462483169448 9 0.12161135039270331 0.8813089069321474 >10 0.3242969343805422 4.198457709412868 >50 0.010134279199391943 0.5263372638622547 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 75 0.30601003712921787 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 54 0.22032722673303684 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 43 0.17544575462075157 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 39 0.15912521930719328 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 36 0.14688481782202456 No Hit CTTATACACATCTCCGAGCCCACGAGACTCCTGAGCATCTCGT 34 0.13872455016524543 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGACTGTCTCT 29 0.11832388102329756 No Hit TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT 29 0.11832388102329756 No Hit TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT 26 0.10608347953812884 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.004080133828389571 0.0 6 0.0 0.0 0.0 0.004080133828389571 0.0 7 0.0 0.0 0.0 0.004080133828389571 0.0 8 0.0 0.0 0.0 0.004080133828389571 0.0 9 0.0 0.0 0.0 0.004080133828389571 0.0 10 0.0 0.0 0.0 0.004080133828389571 0.0 11 0.0 0.0 0.0 0.008160267656779142 0.0 12 0.0 0.0 0.0 0.008160267656779142 0.0 13 0.0 0.0 0.0 0.008160267656779142 0.0 14 0.0 0.0 0.0 0.008160267656779142 0.0 15 0.0 0.0 0.0 0.008160267656779142 0.0 16 0.0 0.0 0.0 0.012240401485168714 0.0 17 0.0 0.0 0.0 0.012240401485168714 0.0 18 0.0 0.0 0.0 0.012240401485168714 0.0 19 0.0 0.0 0.0 0.012240401485168714 0.0 20 0.0 0.0 0.0 0.012240401485168714 0.0 21 0.0 0.0 0.0 0.016320535313558284 0.0 22 0.0 0.0 0.0 0.028560936798727 0.0 23 0.0 0.0 0.0 0.04080133828389571 0.0 24 0.0 0.0 0.0 0.10608347953812886 0.0 25 0.0 0.0 0.0 0.1264841486800767 0.0 26 0.0 0.0 0.0 0.16320535313558285 0.0 27 0.0 0.0 0.0 0.3876127136970093 0.0 28 0.0 0.0 0.0 1.0567546615528989 0.0 29 0.0 0.0 0.0 1.9135827655147088 0.0 30 0.0 0.0 0.0 3.0192990330082825 0.0 31 0.0 0.0 0.0 5.087926884001795 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGGGG 20 0.0018070043 37.0 8 ACATCTC 20 0.0018070043 37.0 8 CCGAGCC 40 0.0018780575 23.125 14 GGTATCA 130 2.7284841E-11 19.923077 1 GTATCAA 135 4.5474735E-11 19.185184 2 AACGCAG 155 6.1263563E-9 15.5161295 7 CAACGCA 170 1.2314558E-9 15.235293 6 TCAACGC 175 1.8571882E-9 14.8 5 CATGGGA 75 0.0039540217 14.8 18 ATCAACG 175 1.8571882E-9 14.8 4 TATCAAC 180 2.764864E-9 14.388888 3 GAGTACA 155 1.05432264E-7 14.322581 13 AGTACAT 160 1.554672E-7 13.875 14 ACATGGG 165 2.2635322E-7 13.454545 17 ACGCAGA 180 4.39868E-8 13.361111 8 TCTTATA 195 8.536517E-9 13.282052 37 CGCAGAG 185 6.299342E-8 13.000001 9 TACATGG 175 4.6326568E-7 12.685715 16 CAGAGTA 195 1.2535565E-7 12.333334 11 AGAGTAC 195 1.2535565E-7 12.333334 12 >>END_MODULE