ERR1631600.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631600.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	212581
Sequences flagged as poor quality	0
Sequence length	43
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1532	0.7206664753670365	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	1313	0.6176469204679628	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1100	0.5174498191277678	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	545	0.2563728649314849	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	309	0.14535635828225477	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA	300	0.14112267794393665	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	294	0.13830022438505793	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT	231	0.10866446201683122	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	224	0.10537159953147271	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG	222	0.10443078167851312	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	213	0.10019710134019502	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CATAGTA	20	0.0018385631	37.0	3
TAATGTG	20	0.0018385631	37.0	14
TCAGATA	45	1.3182612E-4	24.666666	2
GACGGCC	45	1.3182612E-4	24.666666	11
CGTCGTA	45	1.3182612E-4	24.666666	10
ACCGTCG	45	1.3182612E-4	24.666666	8
TACCGTC	45	1.3182612E-4	24.666666	7
CGTTATT	55	1.8932164E-5	23.545454	2
ATACCGT	55	1.8932164E-5	23.545454	6
GGCAGTC	150	0.0	23.433334	8
GCATTCG	40	0.0019260407	23.125	22
GACCCGC	65	2.6658017E-6	22.76923	14
CCATGAC	50	2.6920743E-4	22.2	10
TGACCCG	50	2.6920743E-4	22.2	13
AGTCGGT	150	0.0	22.2	11
CAGTCGG	155	0.0	21.483871	10
AACGAAC	70	5.0697126E-6	21.142857	14
TACCCTC	45	0.00381571	20.555555	5
GCCTTAT	135	1.8189894E-12	20.555555	26
ATTCGTA	45	0.00381571	20.555555	24