ERR1631596.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631596.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	145162
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	275	0.18944351827613287	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	244	0.16808806712500518	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	232	0.15982144087295572	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	208	0.14328818836885687	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	195	0.1343326765958033	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	181	0.12468827930174563	No Hit
GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC	176	0.12124385169672504	No Hit
GTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTG	176	0.12124385169672504	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	172	0.11848830961270855	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	154	0.10608837023463441	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACACT	20	0.0018366434	37.0	4
TTGCCAA	25	0.005480733	29.599998	28
TCAAGAT	25	0.005480733	29.599998	3
GTGGGTA	45	3.9766237E-6	28.777779	9
GTCGGGA	50	9.019848E-6	25.899998	2
ATTTGCG	45	1.3154469E-4	24.666668	16
AAGACGG	55	1.887854E-5	23.545454	5
CGAAAGC	40	0.0019231131	23.125	19
AGACGGA	40	0.0019231131	23.125	6
ACGGACC	40	0.0019231131	23.125	8
CGGACCA	40	0.0019231131	23.125	9
CAGAGCG	50	2.6863746E-4	22.199999	14
ATAGAGC	70	5.0514373E-6	21.142857	30
TACACAT	80	6.8743066E-7	20.8125	37
GCGAAAG	45	0.0038099652	20.555557	18
GAGCGAA	45	0.0038099652	20.555557	16
AGCGAAA	45	0.0038099652	20.555557	17
AGAGCGA	45	0.0038099652	20.555557	15
CTTATAC	735	0.0	20.387756	37
GGTATCA	410	0.0	20.304876	1