ERR1631575.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631575.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	22184
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	36	0.16227912008654888	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	34	0.15326361341507394	No Hit
TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT	34	0.15326361341507394	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA	31	0.13974035340786153	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGACTGTCTCT	29	0.1307248467363866	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC	26	0.11720158672917419	No Hit
TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT	24	0.10818608005769925	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	24	0.10818608005769925	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	24	0.10818608005769925	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTTATA	90	0.0	28.777777	37
GGGAAGC	40	0.0018723616	23.125	19
TGGGAAG	50	2.5880264E-4	22.2	18
CTCTTAT	120	9.094947E-12	21.583334	36
GGTATCA	80	6.34931E-7	20.8125	1
GGAAGCA	45	0.0037103663	20.555555	20
TCTCTTA	145	1.2551027E-10	17.862068	35
GTATCAA	95	3.2950065E-6	17.526316	2
CTCTATG	70	0.002486508	15.857142	1
ATGGGCA	75	0.0039379676	14.8	5
TCTATGG	75	0.0039379676	14.8	2
CTATGGG	75	0.0039379676	14.8	3
TATGGGC	75	0.0039379676	14.8	4
GTCTCTT	180	2.7102942E-9	14.388888	34
TCAACGC	120	3.023113E-5	13.875001	5
ATCAACG	120	3.023113E-5	13.875001	2
CAACGCA	120	3.023113E-5	13.875001	6
GCTGTCT	110	2.290454E-4	13.454545	36
AACGCAG	125	4.4396777E-5	13.320001	7
ATGGGAA	85	0.00902954	13.058823	17