##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631568.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 656397 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.773071784301266 34.0 31.0 34.0 31.0 34.0 2 32.9033024221622 34.0 33.0 34.0 31.0 34.0 3 32.951029636028196 34.0 33.0 34.0 31.0 34.0 4 36.36395656896665 37.0 37.0 37.0 35.0 37.0 5 36.3586076718815 37.0 37.0 37.0 35.0 37.0 6 36.43260404907396 37.0 37.0 37.0 35.0 37.0 7 36.41873744090847 37.0 37.0 37.0 35.0 37.0 8 36.42046048351836 37.0 37.0 37.0 35.0 37.0 9 38.25279061299793 39.0 39.0 39.0 37.0 39.0 10 38.21159146065567 39.0 39.0 39.0 37.0 39.0 11 38.27158868794343 39.0 39.0 39.0 37.0 39.0 12 38.06439090976954 39.0 39.0 39.0 37.0 39.0 13 38.18087681692634 39.0 39.0 39.0 37.0 39.0 14 39.60642873139274 41.0 39.0 41.0 37.0 41.0 15 39.59171507487085 41.0 39.0 41.0 37.0 41.0 16 39.51692801764786 41.0 39.0 41.0 37.0 41.0 17 39.51615104883173 41.0 39.0 41.0 37.0 41.0 18 39.61685382474326 41.0 39.0 41.0 37.0 41.0 19 39.65459622758788 41.0 40.0 41.0 37.0 41.0 20 39.66747258137987 41.0 40.0 41.0 37.0 41.0 21 39.64711752186558 41.0 40.0 41.0 37.0 41.0 22 39.579117515771706 41.0 40.0 41.0 37.0 41.0 23 39.51783143433014 41.0 39.0 41.0 37.0 41.0 24 39.47509205557003 41.0 39.0 41.0 36.0 41.0 25 39.424826743571344 41.0 39.0 41.0 36.0 41.0 26 39.28773745157275 41.0 39.0 41.0 36.0 41.0 27 39.16974026389517 41.0 39.0 41.0 35.0 41.0 28 39.042375269844314 41.0 39.0 41.0 35.0 41.0 29 38.87683825489757 40.0 38.0 41.0 35.0 41.0 30 38.68177642493796 40.0 38.0 41.0 35.0 41.0 31 38.46547440040098 40.0 37.0 41.0 35.0 41.0 32 38.27049179079124 40.0 37.0 41.0 35.0 41.0 33 38.091702125390576 40.0 36.0 41.0 35.0 41.0 34 37.96350227072945 40.0 36.0 41.0 34.0 41.0 35 37.79043779907587 40.0 35.0 41.0 34.0 41.0 36 37.630824028750894 40.0 35.0 41.0 34.0 41.0 37 37.45197951849262 40.0 35.0 41.0 33.0 41.0 38 37.25370012355328 40.0 35.0 41.0 33.0 41.0 39 37.0212660935379 40.0 35.0 41.0 33.0 41.0 40 36.802785509379234 40.0 35.0 41.0 33.0 41.0 41 36.51355658237317 39.0 35.0 41.0 31.0 41.0 42 36.23738225494632 39.0 35.0 41.0 31.0 41.0 43 35.18098041276849 38.0 35.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 0.0 11 10.0 12 3.0 13 5.0 14 5.0 15 1.0 16 6.0 17 9.0 18 26.0 19 51.0 20 82.0 21 149.0 22 264.0 23 440.0 24 701.0 25 1056.0 26 1530.0 27 2374.0 28 3540.0 29 5072.0 30 6374.0 31 7786.0 32 9742.0 33 13095.0 34 17773.0 35 25457.0 36 41454.0 37 96018.0 38 140520.0 39 282852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.1619979981627 14.970817965347191 14.422826429736881 25.444357606753233 2 19.681534193483515 20.43839322848825 33.49344984818639 26.386622729841847 3 20.225564711599837 22.226183239716207 29.546295915429226 28.001956133254723 4 14.183337218177414 17.44066471967422 31.284268514328982 37.091729547819384 5 14.668714208017406 37.48387027972401 30.81001284283749 17.0374026694211 6 31.080276113388695 31.509437124179424 18.947527182482553 18.462759579949328 7 30.88527217522323 30.875826671968337 17.89679111878939 20.342110034019043 8 33.27452745823031 29.046903017533598 17.498251820163713 20.180317704072383 9 30.514764692708834 12.610356232584854 17.2151914161704 39.65968765853592 10 20.6170960561977 26.13844974916095 25.07126022818508 28.173193966456278 11 34.83379722942061 24.691002548762413 16.506016937920194 23.96918328389679 12 24.61696199099021 27.793393327513684 24.6393569745139 22.95028770698221 13 34.55881120724196 18.171777140968043 24.0022425452889 23.267169106501097 14 24.660380836597366 20.371055931090485 24.357362998307426 30.611200234004727 15 31.288381878649655 23.80434401741629 20.637205837321012 24.27006826661304 16 25.007579254627917 24.765500147014688 24.647583703155256 25.579336895202143 17 21.843640357893165 28.194217828539742 25.238080003412566 24.724061810154527 18 23.575062043245172 22.452722971006875 28.005612457095324 25.966602528652626 19 24.030731401880264 26.74341899795398 28.614238029728963 20.611611570436793 20 25.74828952600332 21.943275182549584 30.04888809668539 22.259547194761705 21 27.682027797201997 21.353845310079116 27.76018171929488 23.20394517342401 22 26.966911792710814 21.980447808262376 25.2819558894998 25.77068450952701 23 23.98365623243251 24.024942222465977 26.21995530144105 25.771446243660467 24 23.70303337766626 23.86101703694563 28.710673571024852 23.72527601436326 25 23.22024628388003 23.45760263986581 26.959294451376227 26.362856624877935 26 25.722999952772486 22.80860515815886 26.696496175332918 24.771898713735744 27 24.68765091857519 22.738525617880644 25.760934312618733 26.81288915092543 28 22.742029594894554 23.595171824368485 28.23519912491983 25.427599455817134 29 22.914790896363023 24.036672928121245 29.592609350743526 23.455926824772202 30 22.336177648587668 24.937347367523007 30.710835058661146 22.01563992522818 31 22.730298889239286 25.77510256750107 27.670449438373424 23.82414910488622 32 21.399701704913337 25.320042596172744 30.595356164028782 22.68489953488514 33 22.979690644533722 23.690997978357608 30.22317286642078 23.10613851068789 34 23.74523344865988 24.612696279842837 27.107375566920627 24.53469470457665 35 22.56058452430465 25.80922825668003 27.83148003418663 23.798707184828693 36 20.728613933336078 25.31958555569267 29.0912359441009 24.860564566870355 37 21.615729505162275 25.18216871801669 28.819906245762855 24.382195531058183 38 21.812561605248042 22.72725195270545 30.8487089368172 24.611477505229303 39 22.278438201271484 22.680633823737768 30.687678341004 24.35324963398675 40 21.110242734198966 22.586635831668943 29.76963636335937 26.533485070772716 41 18.66416208483585 23.381276879693235 32.31687530564582 25.637685729825087 42 19.353226781962746 22.579780224467815 31.227747841626336 26.839245151943107 43 18.165987961553757 24.33283515921005 32.82601840044973 24.675158478786464 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 21.0 1 66.5 2 112.0 3 503.5 4 895.0 5 895.0 6 1242.5 7 1590.0 8 1515.0 9 1440.0 10 2483.5 11 3527.0 12 3527.0 13 6503.5 14 9480.0 15 15972.0 16 22464.0 17 19666.5 18 16869.0 19 16869.0 20 18528.5 21 20188.0 22 13564.5 23 6941.0 24 6217.0 25 5493.0 26 5493.0 27 5166.0 28 4839.0 29 5563.0 30 6287.0 31 7226.5 32 8166.0 33 8166.0 34 9157.5 35 10149.0 36 11184.5 37 12220.0 38 14166.5 39 16113.0 40 16113.0 41 18872.0 42 21631.0 43 24883.5 44 28136.0 45 33285.0 46 38434.0 47 38434.0 48 50226.5 49 62019.0 50 62280.0 51 62541.0 52 55216.5 53 47892.0 54 47892.0 55 42093.5 56 36295.0 57 35152.5 58 34010.0 59 31906.5 60 29803.0 61 29803.0 62 29843.0 63 29883.0 64 28819.0 65 27755.0 66 26153.5 67 24552.0 68 24552.0 69 22625.0 70 20698.0 71 18673.0 72 16648.0 73 14429.0 74 12210.0 75 12210.0 76 10004.5 77 7799.0 78 6334.0 79 4869.0 80 3653.5 81 2438.0 82 2438.0 83 1830.0 84 1222.0 85 855.0 86 488.0 87 324.0 88 160.0 89 160.0 90 118.0 91 76.0 92 53.5 93 31.0 94 20.5 95 10.0 96 10.0 97 6.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 656397.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.312120632670975 #Duplication Level Percentage of deduplicated Percentage of total 1 85.15780345221759 43.69627483553474 2 8.39460790858482 8.614902673385561 3 2.3084998413831377 3.553620670246601 4 1.0797790103274796 2.216230033381988 5 0.590076583008641 1.5139040404926836 6 0.38984530417281765 1.2002273565477557 7 0.27529083791507974 0.988802967891735 8 0.20384745473443952 0.8367876150397198 9 0.16548325702915748 0.7642167162630682 >10 1.1843866827743155 12.164584326501892 >50 0.14617885852424142 5.214317746939105 >100 0.0919944288068844 8.489592670352797 >500 0.006549765157771611 2.2380028542757713 >1k 0.004763465569288444 3.7453321486879925 >5k 2.9771659808052776E-4 1.329052889569912 >10k+ 5.954331961610555E-4 3.4341504548886923 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12386 1.8869677954043058 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10094 1.537788868626761 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8700 1.325417392218429 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3324 0.5064008519234549 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 3159 0.48126362551931223 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA 2015 0.3069788557839234 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCA 1482 0.2257779971572082 No Hit CTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATA 1465 0.22318810110344808 No Hit CCCATAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1415 0.21557075976885942 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC 1348 0.2053635223805106 No Hit TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT 1322 0.20140250488652447 No Hit GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGC 1313 0.2000313834462985 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATACTGTCT 1289 0.19637505960569593 No Hit TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT 1172 0.17855048088275846 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGACTGTCTCT 1114 0.1697143649346356 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1052 0.16026886167974563 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 1017 0.15493672274553358 No Hit CCCATAGAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1016 0.1547843759188418 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATA 1014 0.15447968226545825 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAA 992 0.15112805207823923 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 970 0.14777642189102022 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 951 0.1448818321838765 No Hit CTCTATGGGCATATCAATAAGCGGAGGAATCACCGACTGCCCA 894 0.13619806306244545 No Hit GTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAAT 848 0.12919010903462386 No Hit CCTTATTGATATGCCCATAGAGAGGCCCATGTACTCTGCGTTG 719 0.10953736839138509 No Hit GCCCATAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA 704 0.10725216599100848 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 678 0.10329114849702238 No Hit CTATGGGCATATCAATAAGCGGAGGAATCACCGACTGCCCATA 664 0.10115829292333756 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 1.5234682669177342E-4 0.0 13 0.0 0.0 0.0 3.0469365338354684E-4 0.0 14 0.0 0.0 0.0 9.140809601506406E-4 0.0 15 0.0 0.0 0.0 0.0012187746135341874 0.0 16 0.0 0.0 0.0 0.0027422428804519216 0.0 17 0.0 0.0 0.0 0.005484485760903843 0.0 18 0.0 0.0 0.0 0.006398566721054484 0.0 19 0.0 0.0 0.0 0.008226728641355764 0.0 20 0.0 0.0 0.0 0.011426012001883007 1.5234682669177342E-4 21 0.0 0.0 0.0 0.015387029495869117 1.5234682669177342E-4 22 0.0 0.0 0.0 0.02361375813722488 1.5234682669177342E-4 23 0.0 0.0 0.0 0.03321160821880661 1.5234682669177342E-4 24 0.0 0.0 0.0 0.04981741232820991 1.5234682669177342E-4 25 1.5234682669177342E-4 0.0 0.0 0.056825366356031484 1.5234682669177342E-4 26 1.5234682669177342E-4 0.0 0.0 0.0659661759575379 1.5234682669177342E-4 27 1.5234682669177342E-4 0.0 0.0 0.1043575762838648 1.5234682669177342E-4 28 1.5234682669177342E-4 0.0 0.0 0.24162206713315265 1.5234682669177342E-4 29 1.5234682669177342E-4 0.0 0.0 0.4809589318659287 1.5234682669177342E-4 30 1.5234682669177342E-4 0.0 0.0 0.8021060425321871 1.5234682669177342E-4 31 1.5234682669177342E-4 0.0 0.0 1.549824267935411 1.5234682669177342E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACACAG 30 3.5978112E-4 30.833332 5 GTCTGAC 25 0.0054946467 29.6 1 TATAGAG 35 8.8653265E-4 26.42857 2 ATGCCCC 345 0.0 26.275362 37 ACTGTTA 45 1.322367E-4 24.666668 24 TTAGTCC 45 1.322367E-4 24.666668 28 TATTGAC 275 0.0 23.545456 30 ATTGACT 275 0.0 23.545456 31 TTGAATA 40 0.0019303099 23.125 4 TATGCCT 90 3.8216967E-9 22.611113 36 GTTAGTC 50 2.7003908E-4 22.2 27 CCGGATA 60 3.7231523E-5 21.583332 4 GGGCAGT 2690 0.0 20.769518 7 AGTCGGT 2690 0.0 20.631971 11 CAGTCGG 2700 0.0 20.624073 10 GATACCG 45 0.0038240848 20.555557 5 AGTCTTA 45 0.0038240848 20.555557 27 GTTATAC 45 0.0038240848 20.555557 3 GCAGTCG 2710 0.0 20.547972 9 TGGGCAG 2770 0.0 20.303247 6 >>END_MODULE