ERR1631560.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631560.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	49677
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	115	0.23149546067596674	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	111	0.22344344465245486	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	91	0.18318336453489542	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	78	0.1570143124584818	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	77	0.15500130845260382	No Hit
GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC	69	0.13889727640558006	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT	55	0.11071522032328844	No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC	53	0.1066892123115325	No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGG	51	0.10266320429977654	No Hit
AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC	51	0.10266320429977654	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	50	0.1006502002938986	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	55	6.061455E-7	26.90909	1
GGGCATC	50	0.00694281	18.5	32
GGCATCA	50	0.00694281	18.5	33
GTCTGTC	50	0.00694281	18.5	30
CTAAGGG	70	1.18966185E-4	18.5	28
GCATCAC	50	0.00694281	18.5	34
TAAGGGC	70	1.18966185E-4	18.5	29
GTATCAA	85	2.639195E-5	17.411764	2
CACACGC	65	0.0015513418	17.076923	8
GCACACG	65	0.0015513418	17.076923	7
CTTATAC	145	2.75395E-9	16.586208	37
TCTAAGG	90	4.3098E-5	16.444445	27
CGCTGAG	80	3.3017786E-4	16.1875	12
AGGCACA	80	3.3017786E-4	16.1875	5
TCTTATA	240	0.0	16.1875	37
ACGCTGA	70	0.0025459593	15.857143	11
ATCTAAG	95	6.844833E-5	15.578948	26
CGGACAT	95	6.844833E-5	15.578948	21
GGACATC	100	1.0603E-4	14.8	22
ACATCTA	100	1.0603E-4	14.8	24