##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631560.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 49677 Sequences flagged as poor quality 0 Sequence length 43 %GC 55 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.85458059061538 34.0 31.0 34.0 31.0 34.0 2 33.02560541095477 34.0 33.0 34.0 31.0 34.0 3 33.113573686011634 34.0 33.0 34.0 31.0 34.0 4 36.41457817501057 37.0 37.0 37.0 35.0 37.0 5 36.37113754856372 37.0 37.0 37.0 35.0 37.0 6 36.4083579926324 37.0 37.0 37.0 35.0 37.0 7 36.42631398836484 37.0 37.0 37.0 35.0 37.0 8 36.410250216397934 37.0 37.0 37.0 35.0 37.0 9 38.22881816534815 39.0 39.0 39.0 37.0 39.0 10 38.17237353302333 39.0 38.0 39.0 37.0 39.0 11 38.22912011594903 39.0 39.0 39.0 37.0 39.0 12 38.160537069468766 39.0 38.0 39.0 37.0 39.0 13 38.20804396400749 39.0 38.0 39.0 37.0 39.0 14 39.68516617348069 41.0 40.0 41.0 38.0 41.0 15 39.69627795559313 41.0 40.0 41.0 38.0 41.0 16 39.65666203675745 41.0 40.0 41.0 37.0 41.0 17 39.638665780944905 41.0 40.0 41.0 37.0 41.0 18 39.60853111097691 41.0 40.0 41.0 37.0 41.0 19 39.615053243955956 41.0 40.0 41.0 37.0 41.0 20 39.60027779455281 41.0 40.0 41.0 37.0 41.0 21 39.55258972965356 41.0 39.0 41.0 37.0 41.0 22 39.48551643617771 41.0 39.0 41.0 37.0 41.0 23 39.42603216780402 41.0 39.0 41.0 37.0 41.0 24 39.37639148901906 41.0 39.0 41.0 37.0 41.0 25 39.34444511544578 41.0 39.0 41.0 36.0 41.0 26 39.28298810314632 40.0 39.0 41.0 36.0 41.0 27 39.21231153249995 40.0 39.0 41.0 36.0 41.0 28 39.09998590897196 40.0 39.0 41.0 36.0 41.0 29 39.0356503009441 40.0 39.0 41.0 35.0 41.0 30 39.00148962296435 40.0 39.0 41.0 35.0 41.0 31 38.99325643658031 40.0 39.0 41.0 35.0 41.0 32 38.93351047768585 40.0 38.0 41.0 35.0 41.0 33 38.83167260502849 40.0 38.0 41.0 35.0 41.0 34 38.77903255027478 40.0 38.0 41.0 35.0 41.0 35 38.6802745737464 40.0 38.0 41.0 35.0 41.0 36 38.62127342633412 40.0 38.0 41.0 35.0 41.0 37 38.57652434728345 40.0 38.0 41.0 35.0 41.0 38 38.52048231575981 40.0 38.0 41.0 35.0 41.0 39 38.428689333091775 40.0 38.0 41.0 35.0 41.0 40 38.34114378887614 40.0 38.0 41.0 34.0 41.0 41 38.28999335708678 40.0 37.0 41.0 34.0 41.0 42 38.16007407854742 40.0 37.0 41.0 34.0 41.0 43 37.26984318698794 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 0.0 18 0.0 19 3.0 20 7.0 21 8.0 22 15.0 23 20.0 24 37.0 25 47.0 26 72.0 27 110.0 28 131.0 29 189.0 30 247.0 31 393.0 32 467.0 33 693.0 34 1068.0 35 1600.0 36 2626.0 37 5061.0 38 12963.0 39 23919.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.50906858304648 17.46683575900316 12.076011031261952 26.948084626688406 2 22.434929645509992 18.17138716106045 29.991746683575897 29.401936509853655 3 22.447007669545265 18.82360045896491 27.314451355758194 31.414940515731626 4 16.554944944340438 14.187652233427944 31.237796163214366 38.01960665901725 5 18.576000966241924 32.79183525575216 31.429031543772773 17.203132234233145 6 39.3039032147674 31.19351007508505 13.555568975582261 15.947017734565291 7 32.42748153068825 26.891720514523826 18.525675866094975 22.15512208869296 8 30.434607564869054 28.64907301165529 18.076775972784187 22.839543450691465 9 27.386919499969803 13.676349215934941 17.55742093926767 41.37931034482759 10 20.907059605048612 22.863699498762003 28.765827243996217 27.463413652193168 11 40.64657688668801 19.530164865028084 17.60573303540874 22.217525212875174 12 25.812750367373233 22.692594158262374 23.813837389536406 27.68081808482799 13 33.60307587012098 16.26507236749401 22.01219880427562 28.119652958109388 14 25.732230207138112 18.33041447752481 20.528614851943555 35.40874046339352 15 29.577067858365037 24.3352054270588 18.445155705859857 27.642571008716306 16 29.38784548181251 22.336292449221972 20.152183102844376 28.12367896612114 17 28.33504438673833 22.551683877850916 20.589004972119895 28.524266763290857 18 28.073353865974195 20.442055679690803 22.344344465245484 29.140245989089518 19 28.781931276043238 22.088692956498985 21.51699981882964 27.612375948628138 20 29.798498299011616 20.001207802403524 20.80037039273708 29.399923505847774 21 30.768766229844797 21.39018056645933 20.61517402419631 27.225879179499568 22 31.61624091631942 20.54471888399058 20.69368118042555 27.145359019264447 23 29.202649113271733 20.607122008172794 20.844656480866398 29.345572397689075 24 28.1277049741329 21.965899712140427 21.66394911125873 28.242446202467942 25 28.588682891478957 21.176802141836262 21.170763129818628 29.063751836866153 26 28.439720595043983 22.47921573363931 21.545181874911933 27.535881796404777 27 29.50661271815931 20.397769591561488 21.929665640034624 28.16595205024458 28 28.10354892606236 20.97147573323671 21.917587615999356 29.007387724701573 29 27.175554079352622 21.48680475874147 23.14350705557904 28.194134106326874 30 27.199710127423156 22.318175413169072 22.312136401151438 28.169978058256333 31 27.93043058155686 22.205447188839905 21.311673410230085 28.55244881937315 32 27.038669806952914 20.907059605048612 22.19336916480464 29.86090142319383 33 26.12073998027256 20.77218833665479 23.4031845723373 29.70388711073535 34 28.093483906032972 19.88847957807436 23.612536988948605 28.405499526944062 35 26.563600861565718 19.379189564587236 24.9109245727399 29.146285001107152 36 24.943132636833948 21.17881514584214 24.914950580751654 28.963101636572258 37 26.698472129959537 18.356583529601224 26.15496104837249 28.78998329206675 38 25.28936932584496 18.475350765948022 26.869577470459166 29.365702437747853 39 25.267226281780303 17.945930712402117 28.465889647120395 28.32095335869718 40 23.354872476196228 18.831652474988424 29.16842804517181 28.645047003643537 41 22.285967349075026 18.942367695311713 30.541296777180587 28.230368178432673 42 22.59596996598023 19.075225959699658 30.843247378062284 27.485556696257824 43 21.160698109789237 18.76924935080621 30.176943052116673 29.893109487287877 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 0.0 1 0.0 2 0.0 3 0.5 4 1.0 5 1.0 6 3.5 7 6.0 8 4.5 9 3.0 10 4.0 11 5.0 12 5.0 13 13.5 14 22.0 15 34.0 16 46.0 17 43.0 18 40.0 19 40.0 20 43.5 21 47.0 22 43.5 23 40.0 24 52.5 25 65.0 26 65.0 27 93.0 28 121.0 29 179.0 30 237.0 31 269.0 32 301.0 33 301.0 34 446.0 35 591.0 36 730.0 37 869.0 38 1078.0 39 1287.0 40 1287.0 41 1494.5 42 1702.0 43 1947.5 44 2193.0 45 2442.0 46 2691.0 47 2691.0 48 3001.0 49 3311.0 50 3500.5 51 3690.0 52 4005.0 53 4320.0 54 4320.0 55 4274.5 56 4229.0 57 4308.5 58 4388.0 59 4435.0 60 4482.0 61 4482.0 62 4267.5 63 4053.0 64 3820.5 65 3588.0 66 3151.0 67 2714.0 68 2714.0 69 2331.0 70 1948.0 71 1579.0 72 1210.0 73 857.5 74 505.0 75 505.0 76 398.0 77 291.0 78 263.5 79 236.0 80 209.0 81 182.0 82 182.0 83 141.5 84 101.0 85 86.0 86 71.0 87 58.5 88 46.0 89 46.0 90 38.5 91 31.0 92 18.0 93 5.0 94 6.0 95 7.0 96 7.0 97 3.5 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 49677.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.74408680073273 #Duplication Level Percentage of deduplicated Percentage of total 1 88.30746705710104 60.70616180526199 2 5.376281112737921 7.391750709583913 3 2.0175695461200585 4.160879280149767 4 1.0746705710102489 2.9550898806288624 5 0.7115666178623719 2.445799867141736 6 0.5387994143484627 2.222356422489281 7 0.2840409956076135 1.3668297199911428 8 0.2430453879941435 1.3366346599029733 9 0.2459736456808199 1.5218310284437466 >10 1.171303074670571 14.380900617992229 >50 0.02342606149341142 1.0568271030859353 >100 0.005856515373352855 0.4549389053284216 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 115 0.23149546067596674 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 111 0.22344344465245486 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 91 0.18318336453489542 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 78 0.1570143124584818 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 77 0.15500130845260382 No Hit GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 69 0.13889727640558006 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 55 0.11071522032328844 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 53 0.1066892123115325 No Hit GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGG 51 0.10266320429977654 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 51 0.10266320429977654 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 50 0.1006502002938986 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.002013004005877972 0.0 15 0.0 0.0 0.0 0.002013004005877972 0.0 16 0.0 0.0 0.0 0.002013004005877972 0.0 17 0.0 0.0 0.0 0.004026008011755944 0.0 18 0.0 0.0 0.0 0.004026008011755944 0.0 19 0.0 0.0 0.0 0.004026008011755944 0.0 20 0.0 0.0 0.0 0.006039012017633915 0.0 21 0.0 0.0 0.0 0.006039012017633915 0.0 22 0.0 0.0 0.0 0.006039012017633915 0.0 23 0.0 0.0 0.0 0.010065020029389858 0.0 24 0.0 0.0 0.0 0.016104032047023775 0.0 25 0.0 0.0 0.0 0.02415604807053566 0.0 26 0.0 0.0 0.0 0.03623407210580349 0.0 27 0.0 0.0 0.0 0.08857217625863076 0.0 28 0.0 0.002013004005877972 0.0 0.37240574108742475 0.0 29 0.0 0.002013004005877972 0.0 0.8977997866215753 0.0 30 0.0 0.002013004005877972 0.0 1.4735189323026754 0.0 31 0.0 0.002013004005877972 0.0 2.8222316162409165 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 55 6.061455E-7 26.90909 1 GGGCATC 50 0.00694281 18.5 32 GGCATCA 50 0.00694281 18.5 33 GTCTGTC 50 0.00694281 18.5 30 CTAAGGG 70 1.18966185E-4 18.5 28 GCATCAC 50 0.00694281 18.5 34 TAAGGGC 70 1.18966185E-4 18.5 29 GTATCAA 85 2.639195E-5 17.411764 2 CACACGC 65 0.0015513418 17.076923 8 GCACACG 65 0.0015513418 17.076923 7 CTTATAC 145 2.75395E-9 16.586208 37 TCTAAGG 90 4.3098E-5 16.444445 27 CGCTGAG 80 3.3017786E-4 16.1875 12 AGGCACA 80 3.3017786E-4 16.1875 5 TCTTATA 240 0.0 16.1875 37 ACGCTGA 70 0.0025459593 15.857143 11 ATCTAAG 95 6.844833E-5 15.578948 26 CGGACAT 95 6.844833E-5 15.578948 21 GGACATC 100 1.0603E-4 14.8 22 ACATCTA 100 1.0603E-4 14.8 24 >>END_MODULE