##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631551.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2285800 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.06106046023274 34.0 33.0 34.0 31.0 34.0 2 33.190112870767344 34.0 33.0 34.0 31.0 34.0 3 33.26031630063873 34.0 33.0 34.0 31.0 34.0 4 36.49772814769446 37.0 37.0 37.0 35.0 37.0 5 36.50585440545979 37.0 37.0 37.0 35.0 37.0 6 36.57018461807682 37.0 37.0 37.0 35.0 37.0 7 36.56787732960014 37.0 37.0 37.0 35.0 37.0 8 36.57380741972176 37.0 37.0 37.0 35.0 37.0 9 38.41955376673375 39.0 39.0 39.0 37.0 39.0 10 38.38529617639338 39.0 39.0 39.0 37.0 39.0 11 38.442320412984515 39.0 39.0 39.0 37.0 39.0 12 38.40572447283227 39.0 39.0 39.0 37.0 39.0 13 38.428351124332835 39.0 39.0 39.0 37.0 39.0 14 39.9528493306501 41.0 40.0 41.0 38.0 41.0 15 39.946055210429606 41.0 40.0 41.0 38.0 41.0 16 39.92128401434946 41.0 40.0 41.0 38.0 41.0 17 39.9164979438271 41.0 40.0 41.0 38.0 41.0 18 39.917576340887216 41.0 40.0 41.0 38.0 41.0 19 39.94810875842156 41.0 40.0 41.0 38.0 41.0 20 39.93830475107183 41.0 40.0 41.0 38.0 41.0 21 39.908251378073324 41.0 40.0 41.0 38.0 41.0 22 39.85384591827806 41.0 40.0 41.0 38.0 41.0 23 39.78924971563566 41.0 40.0 41.0 38.0 41.0 24 39.76365342549654 41.0 40.0 41.0 37.0 41.0 25 39.73652244290839 41.0 40.0 41.0 37.0 41.0 26 39.63211479569516 41.0 40.0 41.0 37.0 41.0 27 39.567858955289175 41.0 40.0 41.0 36.0 41.0 28 39.47543223379123 41.0 39.0 41.0 36.0 41.0 29 39.39503806107271 41.0 39.0 41.0 36.0 41.0 30 39.2896272639776 41.0 39.0 41.0 35.0 41.0 31 39.191100708723425 41.0 39.0 41.0 35.0 41.0 32 39.08208285939277 41.0 39.0 41.0 35.0 41.0 33 38.97377898328813 41.0 39.0 41.0 35.0 41.0 34 38.88978957039111 41.0 39.0 41.0 35.0 41.0 35 38.758823606614754 41.0 38.0 41.0 35.0 41.0 36 38.666374573453496 40.0 38.0 41.0 35.0 41.0 37 38.56448551929303 40.0 38.0 41.0 35.0 41.0 38 38.45169393647738 40.0 38.0 41.0 35.0 41.0 39 38.321368448683174 40.0 38.0 41.0 35.0 41.0 40 38.17152288039198 40.0 38.0 41.0 35.0 41.0 41 38.01959007787208 40.0 37.0 41.0 35.0 41.0 42 37.83927858955289 40.0 37.0 41.0 34.0 41.0 43 37.02246522005425 40.0 35.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 6.0 11 21.0 12 12.0 13 12.0 14 6.0 15 9.0 16 22.0 17 17.0 18 35.0 19 66.0 20 131.0 21 257.0 22 468.0 23 703.0 24 1326.0 25 2051.0 26 3342.0 27 4940.0 28 7543.0 29 10731.0 30 14276.0 31 17575.0 32 21221.0 33 27306.0 34 40933.0 35 62046.0 36 96441.0 37 215800.0 38 426547.0 39 1331953.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.807288476682125 17.0855280426984 13.268352436783621 25.838831043835857 2 18.730072622276666 20.02406159769009 35.03897978825794 26.20688599177531 3 19.654344212092045 22.86105521042961 28.984731822556654 28.499868754921692 4 13.848411934552454 15.875492169043662 33.71511068334937 36.56098521305451 5 15.207192230291364 36.529180155744164 31.932846268264942 16.330781345699535 6 33.302082421909176 33.79167031236329 17.140432233791234 15.765815031936302 7 30.16108145944527 30.02716773121008 20.45760783970601 19.354142969638637 8 29.839618514305716 31.22569778633301 19.092571528567678 19.842112170793598 9 28.448464432583776 13.76747746959489 18.98871292326538 38.795345174555955 10 19.057529092659024 25.573715985650537 29.172368536179892 26.196386385510547 11 36.20154869192405 22.52992387785458 19.72119170531105 21.547335724910315 12 23.852305538542304 25.99068159944002 26.928996412634525 23.228016449383148 13 30.928121445445793 18.469638638551054 25.19135532417534 25.41088459182781 14 23.60678974538455 20.11155831656313 24.90970338612302 31.3719485519293 15 27.113876979613266 25.896010149619393 21.8732610027124 25.116851868054944 16 25.280295738909793 25.060941464695073 24.095765158806547 25.56299763758859 17 23.43131507568466 26.433896228891417 25.096115145682035 25.038673549741887 18 24.572009799632514 23.119914253215505 27.28532680024499 25.022749146906992 19 24.842462157669086 24.94378335812407 26.7223291626564 23.49142532155044 20 25.486919240528483 23.251815556916615 26.91272202292414 24.348543179630763 21 27.753215504418584 23.09847755709161 25.957345349549392 23.190961588940414 22 26.621051710560856 23.206448508180944 25.174643450870594 24.99785633038761 23 24.493350249365648 23.933896228891417 25.980794470207368 25.591959051535568 24 24.332312538279815 24.490156619126783 26.71795432671275 24.459576515880656 25 24.268177443345877 23.65766908740922 26.32181293201505 25.752340537229855 26 25.263977600839972 24.412940764721323 26.42287164231341 23.900209992125294 27 25.60486481756934 23.62437658587803 25.41031586315513 25.360442733397498 28 23.808032198792546 23.879692011549565 27.463863855105437 24.848411934552452 29 23.73051010587103 24.08929040160994 27.820237991075338 24.359961501443696 30 23.131770058622802 24.664712573278504 28.150100621226702 24.053416746871992 31 24.07970951089334 24.795607664712573 26.349811882054425 24.774870942339664 32 23.339006037273602 24.105083559366523 27.438489806632248 25.117420596727623 33 23.478563303876104 23.77338349811882 27.75728410184618 24.990769096158893 34 24.807025986525506 23.787907953451747 26.65793157756584 24.747134482456907 35 24.317481844430834 24.02414909440896 27.28475807157232 24.373610989587892 36 22.708548429433897 24.581809432146294 27.15591915303176 25.55372298538805 37 23.36682999387523 23.541079709510893 27.73567241228454 25.356417884329336 38 22.925365298801296 22.551491819056785 29.04401084959314 25.47913203254878 39 23.10775220929215 22.7708460932715 28.896403884854315 25.22499781258203 40 22.581415696911368 22.750240615976903 29.11475194680199 25.553591740309738 41 20.8367311225829 23.48779420771721 30.24109720885467 25.43437746084522 42 21.67582465657538 23.68321812932015 29.300594977688338 25.340362236416137 43 20.542479657012862 23.32833143757109 29.985956776620874 26.14323212879517 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 137.0 1 235.5 2 334.0 3 1492.0 4 2650.0 5 2650.0 6 3631.0 7 4612.0 8 4418.0 9 4224.0 10 6287.0 11 8350.0 12 8350.0 13 13397.0 14 18444.0 15 28001.5 16 37559.0 17 33026.0 18 28493.0 19 28493.0 20 29976.0 21 31459.0 22 24035.0 23 16611.0 24 17945.0 25 19279.0 26 19279.0 27 21333.5 28 23388.0 29 26992.5 30 30597.0 31 35760.5 32 40924.0 33 40924.0 34 49017.0 35 57110.0 36 67676.5 37 78243.0 38 88209.0 39 98175.0 40 98175.0 41 108119.0 42 118063.0 43 127057.0 44 136051.0 45 145896.5 46 155742.0 47 155742.0 48 167458.5 49 179175.0 50 177877.0 51 176579.0 52 169795.0 53 163011.0 54 163011.0 55 156148.5 56 149286.0 57 141858.5 58 134431.0 59 128473.0 60 122515.0 61 122515.0 62 115958.0 63 109401.0 64 100632.0 65 91863.0 66 82291.5 67 72720.0 68 72720.0 69 62718.5 70 52717.0 71 46801.0 72 40885.0 73 35672.5 74 30460.0 75 30460.0 76 27015.0 77 23570.0 78 18433.0 79 13296.0 80 9847.5 81 6399.0 82 6399.0 83 4917.5 84 3436.0 85 3065.0 86 2694.0 87 2315.0 88 1936.0 89 1936.0 90 1379.0 91 822.0 92 464.0 93 106.0 94 71.5 95 37.0 96 37.0 97 23.5 98 10.0 99 8.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2285800.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.92928488055086 #Duplication Level Percentage of deduplicated Percentage of total 1 85.3893137004402 38.36480801001802 2 7.740599889061314 6.955592351239923 3 2.295088837080674 3.0935010056210936 4 1.083404726386152 1.9470639837095471 5 0.6342011032458912 1.4247101019647146 6 0.4280826433981448 1.1540068222592705 7 0.32453027638883125 1.0206639268166398 8 0.23015273646192683 0.8272478290029004 9 0.19252303840272786 0.7784930194618853 >10 1.311088525635991 11.979808679655255 >50 0.1913507769122003 5.971766128380417 >100 0.15572995484983407 14.220393225006504 >500 0.01553254239201009 4.65481025801731 >1k 0.007912804614797592 5.053427818536605 >5k 1.9537789172339732E-4 0.4760850780613062 >10k+ 2.9306683758509604E-4 2.077621762248547 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19425 0.8498118820544229 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14068 0.6154519205529793 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13843 0.605608539679762 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5722 0.25032811269577393 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 5125 0.22421034211217078 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 3382 0.14795695161431446 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 2766 0.12100796220141745 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA 2590 0.11330825094058973 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 2505 0.10958964038848543 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 8.749671887304226E-5 0.0 2 4.374835943652113E-5 0.0 0.0 8.749671887304226E-5 0.0 3 4.374835943652113E-5 0.0 0.0 8.749671887304226E-5 0.0 4 4.374835943652113E-5 0.0 0.0 8.749671887304226E-5 0.0 5 4.374835943652113E-5 0.0 0.0 1.312450783095634E-4 0.0 6 4.374835943652113E-5 0.0 0.0 1.312450783095634E-4 0.0 7 4.374835943652113E-5 0.0 0.0 1.312450783095634E-4 0.0 8 4.374835943652113E-5 0.0 0.0 1.312450783095634E-4 0.0 9 4.374835943652113E-5 0.0 0.0 1.7499343774608452E-4 4.374835943652113E-5 10 4.374835943652113E-5 0.0 0.0 6.562253915478169E-4 4.374835943652113E-5 11 4.374835943652113E-5 0.0 0.0 0.0018374310963338875 4.374835943652113E-5 12 4.374835943652113E-5 0.0 0.0 0.0031936302388660427 4.374835943652113E-5 13 4.374835943652113E-5 0.0 0.0 0.003674862192667775 4.374835943652113E-5 14 4.374835943652113E-5 0.0 0.0 0.0052935514918190565 4.374835943652113E-5 15 4.374835943652113E-5 0.0 0.0 0.0077872079797007615 4.374835943652113E-5 16 4.374835943652113E-5 0.0 0.0 0.012643275877154607 4.374835943652113E-5 17 8.749671887304226E-5 0.0 0.0 0.017236853617989326 4.374835943652113E-5 18 8.749671887304226E-5 0.0 0.0 0.019293026511505818 4.374835943652113E-5 19 8.749671887304226E-5 0.0 0.0 0.021392947764458832 4.374835943652113E-5 20 8.749671887304226E-5 0.0 0.0 0.02445533292501531 4.374835943652113E-5 21 8.749671887304226E-5 0.0 0.0 0.030405109808382187 1.312450783095634E-4 22 8.749671887304226E-5 0.0 0.0 0.04042348411934552 1.312450783095634E-4 23 8.749671887304226E-5 0.0 0.0 0.05678537054860443 1.312450783095634E-4 24 8.749671887304226E-5 0.0 0.0 0.08080321987925453 1.312450783095634E-4 25 8.749671887304226E-5 0.0 0.0 0.08994662700148745 2.1874179718260565E-4 26 8.749671887304226E-5 0.0 4.374835943652113E-5 0.1037273602239916 2.1874179718260565E-4 27 8.749671887304226E-5 0.0 4.374835943652113E-5 0.14835068684924316 2.1874179718260565E-4 28 1.312450783095634E-4 0.0 4.374835943652113E-5 0.3244815819406772 2.1874179718260565E-4 29 1.312450783095634E-4 0.0 4.374835943652113E-5 0.5950651850555604 2.1874179718260565E-4 30 1.312450783095634E-4 0.0 4.374835943652113E-5 1.0487794207717211 2.1874179718260565E-4 31 1.312450783095634E-4 0.0 4.374835943652113E-5 1.9164843818356812 2.1874179718260565E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATA 80 2.7288479E-8 23.125 2 TTCGGTA 40 0.0019317687 23.125 26 TAACCGG 75 9.272348E-6 19.733334 22 CAGTCGG 2915 0.0 19.54717 10 AGTCGGT 2900 0.0 19.456898 11 GCAGTCG 2920 0.0 19.323631 9 GGCAGTC 2925 0.0 19.22735 8 GGGCAGT 3055 0.0 18.711948 7 GTTATAC 130 6.9849193E-10 18.500002 3 TCGGTGA 3100 0.0 18.022581 13 CGGTGAT 3135 0.0 17.880383 14 GACAGGC 950 0.0 17.721052 7 TAGCGAA 95 3.6095444E-6 17.526316 10 GTCGGTG 3195 0.0 17.428797 12 GCCTTAT 2245 0.0 17.305122 26 GTGATTC 3150 0.0 17.207937 16 CTTATAC 4970 0.0 17.085512 37 CGCTTAT 815 0.0 17.02454 26 CGCCTTA 2290 0.0 16.965065 25 TAAGGTA 120 1.0424992E-7 16.958334 5 >>END_MODULE