ERR1631546.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631546.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	140117
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	376	0.268347167010427	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	370	0.26406503136664355	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	298	0.2126794036412427	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	196	0.1398830976969247	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	183	0.13060513713539398	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	182	0.1298914478614301	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA	178	0.12703669076557447	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	150	0.10705339109458524	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACCAG	20	0.0018364252	37.0	5
CGCAAGA	30	3.5835087E-4	30.833332	2
CGCGCAA	35	8.8304136E-4	26.428572	21
GCGCAAA	35	8.8304136E-4	26.428572	22
CGCAAAT	35	8.8304136E-4	26.428572	23
GCGCGCA	40	0.0019227803	23.125002	20
TACTGCT	40	0.0019227803	23.125002	7
CAAGACG	40	0.0019227803	23.125002	4
GGGGGAC	40	0.0019227803	23.125002	23
GCAAGAC	50	2.6857265E-4	22.2	3
TTATACA	80	6.870796E-7	20.8125	37
GCGAAAG	45	0.0038093128	20.555557	18
AAGAATG	45	0.0038093128	20.555557	33
CCGCTTA	45	0.0038093128	20.555557	25
GCGCAAG	45	0.0038093128	20.555557	1
ACGGACC	45	0.0038093128	20.555557	8
AGCGAAA	45	0.0038093128	20.555557	17
CAGAGCG	45	0.0038093128	20.555557	14
AGAGCGA	45	0.0038093128	20.555557	15
CGCTTAT	45	0.0038093128	20.555557	26