FastQCFastQC Report
Fri 10 Feb 2017
ERR1631497.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631497.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7565
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT490.6477197620621282No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT490.6477197620621282No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT390.5155320555188367No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA230.3040317250495704No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC180.23793787177792464No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT160.21150033046926636No Hit
CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCA140.18506278916060806No Hit
GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGC140.18506278916060806No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC140.18506278916060806No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC140.18506278916060806No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA140.18506278916060806No Hit
CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA130.17184401850627892No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC120.15862524785194976No Hit
AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.14540647719762062No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT110.14540647719762062No Hit
CCCATAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA110.14540647719762062No Hit
GTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTG100.13218770654329146No Hit
CCCATAGAGAGGCCCATGTACTCTGCGTTGATACCCTGTCTCT90.11896893588896232No Hit
TATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATA90.11896893588896232No Hit
ACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCCATTCG90.11896893588896232No Hit
GGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACTAGT90.11896893588896232No Hit
GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGC90.11896893588896232No Hit
TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT90.11896893588896232No Hit
TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT80.10575016523463318No Hit
CCCATAGAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA80.10575016523463318No Hit
CTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATA80.10575016523463318No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATACTGTCT80.10575016523463318No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)