##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631440.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 256554 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9658590394225 31.0 31.0 33.0 28.0 34.0 2 31.1104134022467 31.0 31.0 34.0 28.0 34.0 3 31.025791841093884 31.0 31.0 34.0 27.0 34.0 4 35.05963266992524 35.0 35.0 37.0 32.0 37.0 5 34.112732602103264 35.0 35.0 37.0 30.0 37.0 6 34.048079546606175 35.0 33.0 37.0 30.0 37.0 7 34.085787007803425 35.0 33.0 37.0 30.0 37.0 8 34.05325194695853 35.0 33.0 37.0 30.0 37.0 9 35.45357702471994 37.0 34.0 39.0 30.0 39.0 10 35.21315590479977 37.0 34.0 39.0 30.0 39.0 11 35.349505367291094 37.0 34.0 39.0 30.0 39.0 12 35.06411125922808 37.0 34.0 39.0 29.0 39.0 13 35.19495700710182 37.0 34.0 39.0 30.0 39.0 14 35.87505554386211 38.0 34.0 40.0 29.0 41.0 15 35.73617250169555 38.0 34.0 40.0 29.0 41.0 16 35.5972855617141 38.0 34.0 40.0 28.0 41.0 17 35.60896731292438 38.0 34.0 40.0 29.0 40.0 18 35.86199396618256 38.0 34.0 40.0 29.0 41.0 19 35.89063510995736 38.0 34.0 40.0 29.0 41.0 20 35.95654326184741 38.0 34.0 40.0 29.0 41.0 21 35.92833477552484 38.0 34.0 40.0 29.0 41.0 22 35.83030473116771 38.0 34.0 40.0 29.0 41.0 23 35.75208338205602 38.0 34.0 40.0 29.0 41.0 24 35.67735837289615 38.0 34.0 40.0 29.0 41.0 25 35.64425423107806 38.0 34.0 40.0 29.0 41.0 26 35.3974991619698 38.0 34.0 40.0 27.0 41.0 27 35.241239661046016 37.0 33.0 40.0 27.0 41.0 28 34.997591150401085 37.0 33.0 39.0 27.0 41.0 29 34.68052339858276 37.0 33.0 39.0 26.0 40.0 30 34.37567139861394 37.0 33.0 39.0 25.0 40.0 31 34.08953670572277 36.0 33.0 39.0 25.0 40.0 32 33.80445052503566 35.0 32.0 38.0 24.0 40.0 33 33.50049502249039 35.0 32.0 38.0 24.0 40.0 34 33.34736546691924 35.0 31.0 38.0 23.0 40.0 35 33.15335952664936 35.0 31.0 38.0 22.0 40.0 36 32.918231639342984 35.0 31.0 38.0 21.0 40.0 37 32.69781020759762 35.0 31.0 38.0 21.0 40.0 38 32.454036966876366 35.0 31.0 38.0 20.0 40.0 39 32.06663704327354 35.0 30.0 38.0 19.0 40.0 40 31.801285499349063 35.0 30.0 38.0 18.0 40.0 41 31.342578950240494 35.0 29.0 38.0 15.0 40.0 42 31.01113215931149 34.0 28.0 38.0 14.0 40.0 43 29.946592140446064 33.0 26.0 37.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 6.0 13 5.0 14 7.0 15 10.0 16 19.0 17 44.0 18 87.0 19 178.0 20 281.0 21 485.0 22 793.0 23 1264.0 24 1843.0 25 2720.0 26 3900.0 27 5442.0 28 7473.0 29 9683.0 30 12328.0 31 15427.0 32 19153.0 33 23334.0 34 27920.0 35 32319.0 36 34557.0 37 30823.0 38 19799.0 39 6654.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.60734192411734 13.383537189051816 16.239466155273355 23.769654731557488 2 21.504244720409737 21.46955416793346 32.07862672185973 24.94757438979708 3 20.47872962417269 22.866920804197164 30.018631555150183 26.63571801647996 4 13.999391940877945 19.462179502171082 30.660211885217148 35.878216671733824 5 13.928451709971391 38.639038954761965 29.185278732742425 18.247230602524226 6 26.894143143353837 31.990925886947778 22.06397093789222 19.05096003180617 7 30.02915565533962 32.08954060353766 16.89118080404125 20.990122937081473 8 35.7554355028571 28.477825331119373 16.159560950131358 19.60717821589217 9 32.320681026216704 13.286091816927431 16.102652852810714 38.29057430404515 10 21.524123576323113 26.860621935343048 21.45162421946257 30.163630268871273 11 33.98037060423926 26.813458375234845 14.606281718468628 24.599889302057267 12 26.162913070932436 29.9999220437023 22.646304481707556 21.19086040365771 13 36.24110323752504 18.633893839113792 24.102528122734395 21.02247480062677 14 25.620727020432344 20.903591446635016 24.87117721805156 28.60450431488108 15 32.970446767542114 24.01404772484545 20.354779110830467 22.660726396781964 16 24.44631539558923 25.16234398995923 25.57824083818611 24.813099776265428 17 18.950006626285305 29.928202249818753 27.05239442768384 24.069396696212102 18 23.06337067439993 21.986404421681204 29.726295438777022 25.223929465141843 19 21.816459692696274 28.511736320618663 31.480312137015986 18.191491849669074 20 25.03059784684706 21.744739898812725 32.795045097718216 20.429617156621998 21 28.150408880781434 19.891718702495382 30.90967203785558 21.048200378867605 22 26.617398286520576 21.10510847618825 27.31120933604621 24.966283901244964 23 22.61044458476578 24.029249202896857 27.811688767277065 25.5486174450603 24 21.476180453237916 23.57125595391224 32.84727581717689 22.10528777567296 25 20.73442628062708 23.182254028391682 29.62300334432517 26.460316346656064 26 24.80569392798397 21.938851080084504 28.78107532917047 24.474379662761056 27 22.690349789907778 21.985235077215712 28.167559266275326 27.15685586660118 28 20.87591696095169 22.844703259352805 31.262424284945862 25.01695549474964 29 20.68804228349587 23.53578583845896 33.47755248407743 22.29861939396774 30 20.060104305526323 25.016565713261148 35.01835870810823 19.904971273104298 31 20.758982514402426 26.479415639592446 30.527686179127983 22.23391566687715 32 19.695268832292616 26.05065600224514 34.47227484272317 19.781800322739073 33 21.80554581101834 23.418071828932703 34.39977548586263 20.376606874186333 34 22.2576923376755 25.458188139728865 28.57916851812874 23.704951004466896 35 20.84902203824536 26.569844944923876 29.485410478885537 23.09572253794523 36 17.71868690412155 26.182012363868818 31.585553138910328 24.513747593099307 37 19.115663758896762 26.36248119304318 31.93323822665014 22.588616821409918 38 19.86170552788107 22.302906990341214 33.616704475471046 24.218683006306666 39 20.294752761601845 22.20663096268232 34.75798467379187 22.740631601923962 40 19.844555142387176 21.524123576323113 31.96052293084497 26.67079835044474 41 16.11785433086212 23.19394747304661 35.67981789408857 25.0083803020027 42 16.76021422390608 21.916633535240145 34.158500744482645 27.164651496371135 43 15.198749580984899 24.601838209499753 36.49874880142192 23.700663408093423 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3.0 1 8.0 2 13.0 3 98.0 4 183.0 5 183.0 6 349.0 7 515.0 8 653.5 9 792.0 10 1171.5 11 1551.0 12 1551.0 13 3021.0 14 4491.0 15 8475.0 16 12459.0 17 11453.5 18 10448.0 19 10448.0 20 11206.0 21 11964.0 22 8482.5 23 5001.0 24 4014.0 25 3027.0 26 3027.0 27 2690.5 28 2354.0 29 2356.5 30 2359.0 31 2386.0 32 2413.0 33 2413.0 34 2329.5 35 2246.0 36 2160.0 37 2074.0 38 2479.0 39 2884.0 40 2884.0 41 3875.5 42 4867.0 43 6838.0 44 8809.0 45 12060.0 46 15311.0 47 15311.0 48 22837.5 49 30364.0 50 29477.0 51 28590.0 52 23351.5 53 18113.0 54 18113.0 55 14509.5 56 10906.0 57 10750.5 58 10595.0 59 10406.0 60 10217.0 61 10217.0 62 10325.0 63 10433.0 64 10176.0 65 9919.0 66 9682.0 67 9445.0 68 9445.0 69 8766.0 70 8087.0 71 7140.0 72 6193.0 73 5314.0 74 4435.0 75 4435.0 76 3611.5 77 2788.0 78 2131.0 79 1474.0 80 1099.0 81 724.0 82 724.0 83 537.5 84 351.0 85 232.0 86 113.0 87 69.5 88 26.0 89 26.0 90 20.0 91 14.0 92 8.5 93 3.0 94 1.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 256554.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.46541634343674 #Duplication Level Percentage of deduplicated Percentage of total 1 85.91326195878744 40.77908748296592 2 7.717506599770256 7.326293277826321 3 2.0570940145426397 2.929224715735743 4 1.039811432406571 1.9742033023137289 5 0.6325608817763311 1.501238280804251 6 0.4443851308679308 1.2655755152087373 7 0.2943425182538023 0.9779763123544647 8 0.2140044530235893 0.8126248369691293 9 0.17138504449895114 0.7321376242963034 >10 1.2432282232165657 11.098632565429531 >50 0.1406676490383366 4.638528924319518 >100 0.11094913163587111 10.713520683286387 >500 0.014859258701232739 5.196657037159585 >1k 0.0029718517402465474 1.8309611384997668 >5k 0.0029718517402465474 8.223338302830618 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6889 2.68520467425961 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5502 2.144577749713511 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5098 1.987106028360501 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1449 0.5647933768329475 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 1418 0.5527101506895234 No Hit TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT 1027 0.4003055886869821 No Hit GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGC 977 0.38081651426210467 No Hit TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT 948 0.3695128510956758 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC 926 0.3609376583487297 No Hit CCCATAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 851 0.33170404671141357 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATACTGTCT 850 0.331314265222916 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGACTGTCTCT 833 0.3246879799184577 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA 771 0.3005215276316097 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAA 703 0.2740163864137764 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATA 678 0.2642718492013377 No Hit CTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATA 670 0.26115359729335735 No Hit GTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAAT 623 0.24283386733397258 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCA 609 0.23737692649500688 No Hit CCCATAGAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 576 0.2245141373745878 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 529 0.20619440741520303 No Hit GTCGGTGATTCCTCGCCTTATTGATATGCCCATAGAGCTGTCT 508 0.19800899615675452 No Hit GTACATGGGAAGCAGTGGTATCAAAAAAAAAAAAAAAAAAAAA 497 0.1937213997832815 No Hit GCCCATAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAA 492 0.19177249234079374 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCT 484 0.18865424043281337 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 446 0.17384254386990655 No Hit CCCATAGAGAGGCCCATGTACTCTGCGTTGATACCCTGTCTCT 445 0.17345276238140897 No Hit CCTTATTGATATGCCCATAGAGAGGCCCATGTACTCTGCGTTG 437 0.1703345104734286 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACCTGTCT 430 0.16760604005394575 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 407 0.15864106581850215 No Hit GGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT 404 0.15747172135300952 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCC 392 0.15279434349103893 No Hit GGGCATATCAATAAGCGGAGGAATCACCGACTGCCCATAGAGC 385 0.15006587307155608 No Hit CTCTATGGGCATATCAATAAGCGGAGGAATCACCGACTGCCCA 359 0.13993155437061983 No Hit ACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATAAGGCG 356 0.13876220990512717 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCTTA 355 0.13837242841662964 No Hit CCCATAGAGAGGCCCATGTACTCTGCGTTGATACTGTCTCTTA 336 0.13096658013517623 No Hit TTATTGATATGCCCATAGAGAGGCCCATGTACTCTGCGTTGAT 326 0.12706876525020075 No Hit GTATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCTT 309 0.12044247994574242 No Hit GTACATGGGCCTCTCTATGGGCATATCAATAAGGCGAGGAATC 308 0.12005269845724487 No Hit CTATGGGCATATCAATAAGCGGAGGAATCACCGACTGCCCATA 296 0.11537532059527429 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 295 0.11498553910677674 No Hit CCCATAGAGAGGCCCATGTACTCTGCGTTGATACCTGTCTCTT 286 0.11147750571029881 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCACTGTCT 278 0.10835925380231841 No Hit CATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGT 276 0.10757969082532332 No Hit GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGA 269 0.10485122040584048 ABI Solid3 Adapter B (100% over 21bp) GCCCATAGAGAGGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 267 0.10407165742884539 No Hit TGCCCATAGAGAGGCCCATGTACTCTGCGTTGATACCCTGTCT 263 0.10251253147485519 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 3.8978148849754825E-4 0.0 0.0 10 0.0 0.0 3.8978148849754825E-4 0.0 3.8978148849754825E-4 11 0.0 0.0 3.8978148849754825E-4 3.8978148849754825E-4 3.8978148849754825E-4 12 0.0 0.0 3.8978148849754825E-4 3.8978148849754825E-4 3.8978148849754825E-4 13 0.0 0.0 3.8978148849754825E-4 3.8978148849754825E-4 3.8978148849754825E-4 14 0.0 0.0 3.8978148849754825E-4 7.795629769950965E-4 3.8978148849754825E-4 15 0.0 0.0 3.8978148849754825E-4 0.0019489074424877413 3.8978148849754825E-4 16 0.0 0.0 7.795629769950965E-4 0.003118251907980386 3.8978148849754825E-4 17 0.0 0.0 7.795629769950965E-4 0.004677377861970579 3.8978148849754825E-4 18 0.0 0.0 7.795629769950965E-4 0.0058467223274632244 3.8978148849754825E-4 19 0.0 0.0 7.795629769950965E-4 0.0074058482814534175 7.795629769950965E-4 20 0.0 0.0 7.795629769950965E-4 0.008575192746946063 7.795629769950965E-4 21 0.0 0.0 7.795629769950965E-4 0.011693444654926449 7.795629769950965E-4 22 0.0 0.0 7.795629769950965E-4 0.019878855913374963 7.795629769950965E-4 23 0.0 0.0 7.795629769950965E-4 0.030792737591306314 7.795629769950965E-4 24 0.0 0.0 7.795629769950965E-4 0.04638399713120824 7.795629769950965E-4 25 0.0 0.0 7.795629769950965E-4 0.053789845412661665 7.795629769950965E-4 26 0.0 0.0 7.795629769950965E-4 0.06509350857909056 7.795629769950965E-4 27 0.0 0.0 7.795629769950965E-4 0.10290231296335274 7.795629769950965E-4 28 0.0 0.0 7.795629769950965E-4 0.23698714500650936 7.795629769950965E-4 29 0.0 7.795629769950965E-4 7.795629769950965E-4 0.516070690770754 7.795629769950965E-4 30 0.0 7.795629769950965E-4 7.795629769950965E-4 0.8692127193495327 7.795629769950965E-4 31 0.0 7.795629769950965E-4 7.795629769950965E-4 1.7777933690373178 7.795629769950965E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGTATC 60 0.0 37.0 1 TAATCCT 20 0.0018392724 37.0 4 GCTCTAT 75 0.0 32.066666 1 AGTATCA 75 1.4551915E-11 29.6 2 GGAGTAC 50 2.7068745E-7 29.599998 1 ATTGACT 220 0.0 26.90909 31 TATTGAC 235 0.0 25.978724 30 ATATGCT 50 9.0551985E-6 25.899998 35 GATACAC 45 1.319302E-4 24.666666 3 ATGCCCC 235 0.0 23.617022 37 TATCACT 110 3.6379788E-12 23.545454 33 TTATTGC 55 1.8952E-5 23.545454 29 TTGACTG 270 0.0 23.296297 32 CTCCGAG 40 0.0019271227 23.125 9 GGGTTGA 40 0.0019271227 23.125 1 TCACTGT 115 5.456968E-12 22.52174 35 TATTGCT 50 2.6941826E-4 22.199999 30 GGGTATC 195 0.0 21.820513 1 TGACTGT 290 0.0 21.689655 33 ATCACTG 120 1.0913936E-11 21.583332 34 >>END_MODULE