FastQCFastQC Report
Fri 10 Feb 2017
ERR1631429.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631429.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2252
Sequences flagged as poor quality0
Sequence length43
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC60.2664298401420959No Hit
GTGCAGGAGGCGGCGGGTGGGGGGCTGCCTGCGGGCTGCGTCT50.2220248667850799No Hit
CCCAAGACCCGCCGGGAGGCAGAGGACCTGCAGGTGGGGCAGG50.2220248667850799No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT50.2220248667850799No Hit
GAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATG40.17761989342806395No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC40.17761989342806395No Hit
CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCACTCCCGAC40.17761989342806395No Hit
CGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTGCCTACCA40.17761989342806395No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT30.13321492007104796No Hit
CTCTAGATAACCTCGGGCCGATCGCACGCCCCCCGTGGCGGCG30.13321492007104796No Hit
TCGTAGTTCCGACCATAAACGATGCCGACCGGCGATGCGGCGG30.13321492007104796No Hit
ATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGA30.13321492007104796No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT30.13321492007104796No Hit
GCACCAGGGCCCCCGCCCAGCTCCACCTGCCCCACCTGCAGGT30.13321492007104796No Hit
TCTCTACCTAGTGTGCGGGGAACGAGGCTTCTTCTACACACCC30.13321492007104796No Hit
ATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAGAC30.13321492007104796No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTTAGCT30.13321492007104796No Hit
GCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACCTGTCTCT30.13321492007104796No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCAT30.13321492007104796No Hit
GATCTGCTTGATGGCCTCTTCTGATGCAGCCTGTCCTGGAGCT30.13321492007104796No Hit
ATCTCGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGG30.13321492007104796No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC30.13321492007104796No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC30.13321492007104796No Hit
GTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATCTTTGA30.13321492007104796No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGCTGTCTCTTA30.13321492007104796No Hit
GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC30.13321492007104796No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)