##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631407.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 24827 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.819591573689934 34.0 31.0 34.0 31.0 34.0 2 32.92455794095138 34.0 33.0 34.0 31.0 34.0 3 32.91029927095501 34.0 33.0 34.0 31.0 34.0 4 36.27554678374351 37.0 37.0 37.0 35.0 37.0 5 36.28908043662142 37.0 37.0 37.0 35.0 37.0 6 36.367865630160715 37.0 37.0 37.0 35.0 37.0 7 36.388327224392796 37.0 37.0 37.0 35.0 37.0 8 36.41418616828453 37.0 37.0 37.0 35.0 37.0 9 38.237040319007534 39.0 39.0 39.0 37.0 39.0 10 38.19796995206831 39.0 39.0 39.0 37.0 39.0 11 38.235590284770616 39.0 39.0 39.0 37.0 39.0 12 38.204213155032825 39.0 39.0 39.0 37.0 39.0 13 38.21037580053974 39.0 39.0 39.0 37.0 39.0 14 39.57429411527772 41.0 39.0 41.0 37.0 41.0 15 39.55669231079067 41.0 39.0 41.0 37.0 41.0 16 39.42812260845048 41.0 39.0 41.0 37.0 41.0 17 39.40822491642164 41.0 39.0 41.0 37.0 41.0 18 39.58774721069803 41.0 39.0 41.0 37.0 41.0 19 39.63527611068594 41.0 40.0 41.0 37.0 41.0 20 39.64889032102147 41.0 40.0 41.0 37.0 41.0 21 39.67487010109961 41.0 40.0 41.0 37.0 41.0 22 39.583799895275305 41.0 40.0 41.0 37.0 41.0 23 39.54549482418335 41.0 40.0 41.0 37.0 41.0 24 39.48394892657188 41.0 39.0 41.0 37.0 41.0 25 39.44499939581907 41.0 39.0 41.0 36.0 41.0 26 39.35755427558706 41.0 39.0 41.0 36.0 41.0 27 39.25500463205381 41.0 39.0 41.0 36.0 41.0 28 39.17646111088734 41.0 39.0 41.0 35.0 41.0 29 39.083900592097315 41.0 39.0 41.0 35.0 41.0 30 38.92185926612156 40.0 38.0 41.0 35.0 41.0 31 38.759979055061024 40.0 38.0 41.0 35.0 41.0 32 38.67144640915133 40.0 38.0 41.0 35.0 41.0 33 38.56217021790792 40.0 38.0 41.0 35.0 41.0 34 38.46908607564345 40.0 38.0 41.0 35.0 41.0 35 38.35344584524913 40.0 38.0 41.0 35.0 41.0 36 38.28473033391066 40.0 38.0 41.0 35.0 41.0 37 38.12683771700165 40.0 38.0 41.0 34.0 41.0 38 37.9733354815322 40.0 37.0 41.0 34.0 41.0 39 37.7839851774278 40.0 37.0 41.0 34.0 41.0 40 37.63249687839852 40.0 37.0 41.0 33.0 41.0 41 37.463648447255004 40.0 36.0 41.0 33.0 41.0 42 37.300318201957545 40.0 36.0 41.0 33.0 41.0 43 36.515366335038465 39.0 35.0 41.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 0.0 17 1.0 18 0.0 19 2.0 20 1.0 21 5.0 22 7.0 23 21.0 24 25.0 25 46.0 26 55.0 27 76.0 28 139.0 29 192.0 30 232.0 31 273.0 32 371.0 33 417.0 34 559.0 35 808.0 36 1209.0 37 2627.0 38 4883.0 39 12877.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.14254642123495 13.803520360897409 17.13457123293189 25.919361984935758 2 20.50992870665002 19.64393603737866 34.079832440488175 25.766302815483144 3 17.762919402263663 23.832923832923832 31.638941475007048 26.765215289805454 4 13.775325250735088 19.438514520481736 31.792000644459662 34.99415958432352 5 14.266725742135577 38.1359004309824 30.623917509163412 16.973456317718615 6 27.590929230273492 33.06078060176421 19.950054376283884 19.398235791678413 7 28.803318967253393 32.54924074596205 17.940145808998267 20.70729447778628 8 32.96813952551658 28.94429451806501 18.657107181697345 19.43045877472107 9 29.725701856849398 12.442099327345229 15.475087606235146 42.35711120957023 10 21.315503282716396 24.195432392153705 23.172352680549402 31.316711644580497 11 33.20981189833649 25.01711845974141 14.701736013211422 27.071333628710676 12 24.90433801909212 30.49099770411246 23.34152334152334 21.26314093527208 13 34.70415273693962 18.069037741168888 25.085592298707056 22.141217223184437 14 24.07459620574375 21.79079228259556 23.20860353647239 30.926007975188302 15 32.6297982035687 23.063600112780442 20.715350223546945 23.59125146010392 16 25.162121883433358 25.50046320538124 24.598219680186894 24.739195230998508 17 18.7779433681073 31.24018205985419 23.6516695533089 26.330205018729608 18 24.04237322270109 21.29939179119507 26.47923631530189 28.178998670801946 19 24.57002457002457 29.310830950175216 25.814637290047127 20.30450718975309 20 27.329117493051918 21.08591452853748 29.633060780601767 21.951907197808836 21 32.99230676279857 19.490876867926048 24.81975268860515 22.697063680670237 22 30.362105771941838 21.150360494622788 21.40814435896403 27.07938937447134 23 25.29504168848431 24.525717968340917 22.749426028114552 27.42981431506022 24 23.808756595641842 24.199460265034038 27.554678374350505 24.437104764973615 25 22.70109155355057 23.42208079912998 25.90727836629476 27.96954928102469 26 29.94320699238732 21.855238248680873 22.78970475691787 25.411850002013935 27 25.31115318000564 22.3385829943207 22.689007934909576 29.66125589076409 28 22.781649011157207 22.048576146936803 28.81137471301406 26.358400128891933 29 24.01417811253877 22.193579570628753 30.3701615177025 23.42208079912998 30 24.231683248076692 23.236798646634714 29.96334635678898 22.56817174849962 31 22.938736053490153 25.59310428162887 25.858943891730778 25.6092157731502 32 21.802875901236558 24.586136061545897 31.04684416159826 22.564143875619287 33 22.84609497724252 22.797760502678535 32.06589600032223 22.290248519756716 34 24.36460305312764 24.461272002255612 25.7985257985258 25.37559914609095 35 21.460506706408346 24.40488178193096 27.9453820437427 26.18922946791799 36 18.14153945301486 22.858178595883512 29.302775204414548 29.697506746687075 37 19.591573689934346 22.713175172191566 31.79602851733999 25.899222620534097 38 20.07089056269384 18.677246546099006 33.1614774237725 28.090385467434647 39 19.70838200346397 18.89475168163693 36.44822169412333 24.948644620775767 40 18.8786401901156 18.959197647722238 33.757602610061625 28.404559552100533 41 14.979659241954323 22.2378861723124 36.92753856688283 25.854916018850442 42 14.601039191203125 20.586458291376324 35.59028477061264 29.22221774680791 43 13.122809844121319 24.114874934547064 36.61739235509727 26.144922866234342 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 2.0 2 3.0 3 9.5 4 16.0 5 16.0 6 28.0 7 40.0 8 38.0 9 36.0 10 72.5 11 109.0 12 109.0 13 160.5 14 212.0 15 325.5 16 439.0 17 392.0 18 345.0 19 345.0 20 350.0 21 355.0 22 246.0 23 137.0 24 140.0 25 143.0 26 143.0 27 139.5 28 136.0 29 149.5 30 163.0 31 188.5 32 214.0 33 214.0 34 277.5 35 341.0 36 370.0 37 399.0 38 474.5 39 550.0 40 550.0 41 703.0 42 856.0 43 1198.0 44 1540.0 45 2122.5 46 2705.0 47 2705.0 48 3171.5 49 3638.0 50 3335.5 51 3033.0 52 2484.5 53 1936.0 54 1936.0 55 1631.5 56 1327.0 57 1263.5 58 1200.0 59 1119.0 60 1038.0 61 1038.0 62 973.5 63 909.0 64 869.5 65 830.0 66 750.5 67 671.0 68 671.0 69 609.5 70 548.0 71 477.0 72 406.0 73 323.5 74 241.0 75 241.0 76 187.5 77 134.0 78 117.0 79 100.0 80 71.0 81 42.0 82 42.0 83 30.5 84 19.0 85 13.5 86 8.0 87 5.5 88 3.0 89 3.0 90 3.0 91 3.0 92 1.5 93 0.0 94 0.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 24827.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.06670157489829 #Duplication Level Percentage of deduplicated Percentage of total 1 91.30337581041806 65.79933137310186 2 4.594232059020791 6.621823015265638 3 1.4419852448021462 3.117573609376888 4 0.6483344511513526 1.868933016474 5 0.4303599374021909 1.55073105892778 6 0.3241672255756763 1.4016997623555 7 0.19561815336463223 0.9868288556813147 8 0.1676727028839705 0.9666894912796552 9 0.08383635144198524 0.5437628388448061 >10 0.7098144422088084 10.279131590607001 >50 0.06147999105745584 3.0168767873685907 >100 0.03912363067292645 3.846618600716961 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 199 0.8015467031860475 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 143 0.5759858218874613 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 143 0.5759858218874613 No Hit TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT 130 0.5236234744431465 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGACTGTCTCT 118 0.47528899987916384 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 118 0.47528899987916384 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC 104 0.4188987795545172 No Hit TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT 97 0.390703669392194 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATACTGTCT 79 0.3182019575462198 No Hit GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGC 75 0.30209046602489226 No Hit CTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATA 71 0.2859789745035647 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 68 0.27389535586256897 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA 67 0.26986748298223706 No Hit TCTCCGAGCCCACGAGACCGATCAGTATCTCGTATGCCGTCTT 65 0.26181173722157325 TruSeq Adapter, Index 6 (95% over 21bp) GGTATCAACGCAGAGTACATGGGAACAGTGGCTGTCTCTTATA 63 0.2537559914609095 No Hit GCAGAAATCTCGTATGCCGTCTTCTGCTTGAAAAAAAAAAAAA 60 0.2416723728199138 TruSeq Adapter, Index 25 (96% over 27bp) CCACTGTTCCCATGTACTCTGCGTTGATACCCTGTCTCTTATA 52 0.2094493897772586 No Hit GTCGGTGATTCCTCGCCTTATTGATATGCCCATAGAGCTGTCT 52 0.2094493897772586 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGCTGTCTCTTATAC 45 0.18125427961493537 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACTGTCTCTTATAC 44 0.17722640673460346 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCC 44 0.17722640673460346 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCCTGTCTCTTAT 43 0.17319853385427156 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACCTGTCT 42 0.16917066097393965 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCA 40 0.16111491521327587 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCT 39 0.15708704233294396 No Hit TGATACCACTGCTTCCCATGTACTCTGCGTTGATACCCTGTCT 38 0.15305916945261208 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCTGTCTCT 38 0.15305916945261208 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGCTGTCTCTTAT 38 0.15305916945261208 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCTGT 37 0.14903129657228018 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGCTGTCTCTTATA 36 0.14500342369194827 No Hit CCCATAGAGAGGCCCATGTACTCTGCGTTGATACTGTCTCTTA 35 0.1409755508116164 No Hit CATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGT 34 0.13694767793128448 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGCTGTCTCTT 34 0.13694767793128448 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCTTA 33 0.1329198050509526 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCTGTCTCTTA 33 0.1329198050509526 No Hit CAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCTT 33 0.1329198050509526 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATA 31 0.12486405929028879 No Hit GGGCATATCAATAAGCGGAGGAATCACCGACTGCCCATAGAGC 31 0.12486405929028879 No Hit CATCTCCGAGCCCACGAGACCGATCAGTATCTCGTATGCCGTC 31 0.12486405929028879 No Hit GTCGGTGATTCCTCCGCTTATTGATATGCCCATAGAGCTGTCT 30 0.1208361864099569 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGCTGTCTCTTATA 30 0.1208361864099569 No Hit CCCATAGAGAGGCCCATGTACTCTGCGTTGATACCCTGTCTCT 30 0.1208361864099569 No Hit CTCTATGGGCATATCAATAAGCGGAGGAATCACCGACCTGTCT 29 0.116808313529625 No Hit GTATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCTT 29 0.116808313529625 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCTGTCTCTT 29 0.116808313529625 No Hit CCTTATTGATATGCCCATAGAGAGGCCCATGTACTCTGCGTTG 29 0.116808313529625 No Hit CTCTATGGGCATATCAATAAGCGGAGGAATCACCGACTGCCCA 29 0.116808313529625 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAA 28 0.11278044064929311 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACCCTGTCTCT 28 0.11278044064929311 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCACTGTCT 28 0.11278044064929311 No Hit GTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAAT 28 0.11278044064929311 No Hit CCCATAGAGAGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 27 0.10875256776896121 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 26 0.1047246948886293 No Hit CCACTGTTCCCATGTACTCTGCGTTGATACCTGTCTCTTATAC 26 0.1047246948886293 No Hit TGCCCATAGAGAGGCCCATGTACTCTGCGTTGATACCCTGTCT 25 0.10069682200829742 No Hit ATACCACTGCTTCCCATGTACTCTGCGTTGATACTGTCTCTTA 25 0.10069682200829742 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGCTGTCTCT 25 0.10069682200829742 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGACTGTCTCT 25 0.10069682200829742 No Hit ACACATCTCCGAGCCCACGAGACCGATCAGTATCTCGTATGCC 25 0.10069682200829742 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCACTGTCT 25 0.10069682200829742 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.008055745760663794 0.0 2 0.0 0.0 0.0 0.008055745760663794 0.0 3 0.0 0.0 0.0 0.008055745760663794 0.0 4 0.0 0.0 0.0 0.008055745760663794 0.0 5 0.0 0.0 0.0 0.008055745760663794 0.0 6 0.0 0.0 0.0 0.008055745760663794 0.0 7 0.0 0.0 0.0 0.008055745760663794 0.0 8 0.0 0.0 0.0 0.008055745760663794 0.0 9 0.0 0.0 0.0 0.008055745760663794 0.0 10 0.0 0.0 0.0 0.008055745760663794 0.0 11 0.0 0.0 0.0 0.008055745760663794 0.0 12 0.0 0.0 0.0 0.008055745760663794 0.0 13 0.0 0.0 0.0 0.008055745760663794 0.0 14 0.0 0.0 0.0 0.008055745760663794 0.0 15 0.0 0.0 0.0 0.008055745760663794 0.0 16 0.0 0.0 0.0 0.008055745760663794 0.0 17 0.0 0.0 0.0 0.020139364401659483 0.0 18 0.0 0.0 0.0 0.02416723728199138 0.0 19 0.0 0.0 0.0 0.02416723728199138 0.0 20 0.0 0.0 0.0 0.02416723728199138 0.0 21 0.0 0.0 0.0 0.03625085592298707 0.0 22 0.0 0.0 0.0 0.04027872880331897 0.0 23 0.0 0.0 0.0 0.08861320336730173 0.0 24 0.0 0.0 0.0 0.19736577113626294 0.0 25 0.0 0.0 0.0 0.22556088129858623 0.0 26 0.0 0.0 0.0 0.2618117372215733 0.0 27 0.0 0.0 0.0 0.40681516091352155 0.0 28 0.0 0.0 0.0 0.8659926692713578 0.0 29 0.0 0.0 0.0 1.7279574656623837 0.0 30 0.0 0.0 0.0 3.2102146856245217 0.0 31 0.0 0.0 0.0 5.824304184959923 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCTCG 20 0.0018074334 37.0 6 AAATCTC 20 0.0018074334 37.0 5 GAAATCT 20 0.0018074334 37.0 4 TTCTGCT 20 0.0018074334 37.0 22 AGAAATC 20 0.0018074334 37.0 3 GTCTTCT 20 0.0018074334 37.0 19 CTGCTTG 20 0.0018074334 37.0 24 TTGAAAA 20 0.0018074334 37.0 28 CAGAAAT 20 0.0018074334 37.0 2 CTTGAAA 20 0.0018074334 37.0 27 TACCATG 20 0.0018074334 37.0 7 CGTCTTC 20 0.0018074334 37.0 18 TGAAAAA 20 0.0018074334 37.0 29 AGTGGCT 40 1.518185E-6 32.375 27 ATACCAT 35 2.2961347E-5 31.714285 6 TGCTTGA 25 0.0053945538 29.6 25 GCAGAAA 25 0.0053945538 29.6 1 GCTTGAA 25 0.0053945538 29.6 26 GCCGTCT 25 0.0053945538 29.6 16 CTTCTGC 25 0.0053945538 29.6 21 >>END_MODULE