ERR1631388.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631388.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	137495
Sequences flagged as poor quality	0
Sequence length	43
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	933	0.6785701298229027	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	813	0.5912942288810502	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	666	0.48438125022728096	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	280	0.20364376886432234	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	237	0.17236990436015853	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	189	0.1374595439834176	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	161	0.11709516709698534	No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA	157	0.11418597039892359	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	153	0.11127677370086186	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG	148	0.10764027782828466	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	148	0.10764027782828466	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	147	0.10691297865376923	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	185	0.0	21.000002	37
GCGCGCA	45	0.003808952	20.555555	20
GGTATCA	450	0.0	20.555555	1
TCTCTGT	50	0.0070041823	18.5	34
AAAGTTG	90	2.1243104E-6	18.5	28
CAGGGCT	50	0.0070041823	18.5	4
ACCATCG	75	2.050634E-4	17.266666	21
AGTTGAT	75	2.050634E-4	17.266666	30
GGCGACT	75	2.050634E-4	17.266666	14
CATCGAA	90	4.400323E-5	16.444445	23
GCGACTA	80	3.3555448E-4	16.1875	15
ACGGCGA	80	3.3555448E-4	16.1875	12
CCATCGA	80	3.3555448E-4	16.1875	22
AGGCCCG	70	0.0025769568	15.857143	5
CGAGCCG	70	0.0025769568	15.857143	10
AAGTTGA	105	9.223933E-6	15.857142	29
CGGACAT	95	6.9876725E-5	15.578948	21
ACATCTA	95	6.9876725E-5	15.578948	24
GACACAG	85	5.3216075E-4	15.235294	7
GAAAGTT	85	5.3216075E-4	15.235294	27