##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631388.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 137495 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.73457216626059 34.0 31.0 34.0 31.0 34.0 2 32.8973344485254 34.0 33.0 34.0 31.0 34.0 3 32.990312374995455 34.0 33.0 34.0 31.0 34.0 4 36.36305320193462 37.0 37.0 37.0 35.0 37.0 5 36.333023019018874 37.0 37.0 37.0 35.0 37.0 6 36.3841666969708 37.0 37.0 37.0 35.0 37.0 7 36.38270482563002 37.0 37.0 37.0 35.0 37.0 8 36.39110513109568 37.0 37.0 37.0 35.0 37.0 9 38.20794937997746 39.0 39.0 39.0 37.0 39.0 10 38.1735044910724 39.0 38.0 39.0 37.0 39.0 11 38.22376086403142 39.0 39.0 39.0 37.0 39.0 12 38.0167351540056 39.0 38.0 39.0 37.0 39.0 13 38.143583403032835 39.0 39.0 39.0 37.0 39.0 14 39.631732062984106 41.0 39.0 41.0 37.0 41.0 15 39.6024800901851 41.0 39.0 41.0 37.0 41.0 16 39.55828939234154 41.0 39.0 41.0 37.0 41.0 17 39.56815156914797 41.0 39.0 41.0 37.0 41.0 18 39.56871886250409 41.0 39.0 41.0 37.0 41.0 19 39.59106876613695 41.0 40.0 41.0 37.0 41.0 20 39.549932724826355 41.0 40.0 41.0 37.0 41.0 21 39.52748099930906 41.0 40.0 41.0 37.0 41.0 22 39.461653151023675 41.0 39.0 41.0 37.0 41.0 23 39.389606894796174 41.0 39.0 41.0 36.0 41.0 24 39.349249063602315 41.0 39.0 41.0 36.0 41.0 25 39.34687079530165 41.0 39.0 41.0 36.0 41.0 26 39.24435070366195 41.0 39.0 41.0 36.0 41.0 27 39.15726390050547 41.0 39.0 41.0 35.0 41.0 28 39.056656605694755 40.0 39.0 41.0 35.0 41.0 29 38.962100440016 40.0 39.0 41.0 35.0 41.0 30 38.87907196625332 40.0 38.0 41.0 35.0 41.0 31 38.7975199098149 40.0 38.0 41.0 35.0 41.0 32 38.68909414887814 40.0 38.0 41.0 35.0 41.0 33 38.57316266046038 40.0 38.0 41.0 35.0 41.0 34 38.51318957052984 40.0 38.0 41.0 35.0 41.0 35 38.37795556202044 40.0 38.0 41.0 35.0 41.0 36 38.28269391614241 40.0 38.0 41.0 35.0 41.0 37 38.20277100985491 40.0 38.0 41.0 34.0 41.0 38 38.06376231862977 40.0 37.0 41.0 34.0 41.0 39 37.943467035164915 40.0 37.0 41.0 34.0 41.0 40 37.813505945670755 40.0 37.0 41.0 33.0 41.0 41 37.67136259500345 40.0 37.0 41.0 33.0 41.0 42 37.49451252772828 40.0 37.0 41.0 33.0 41.0 43 36.558013018655224 39.0 35.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 0.0 13 1.0 14 1.0 15 0.0 16 0.0 17 0.0 18 2.0 19 8.0 20 19.0 21 24.0 22 49.0 23 77.0 24 108.0 25 211.0 26 303.0 27 441.0 28 611.0 29 878.0 30 1096.0 31 1388.0 32 1785.0 33 2379.0 34 3338.0 35 4746.0 36 7314.0 37 14865.0 38 30584.0 39 67265.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.139786901341864 18.070475290010545 12.769191606967526 25.020546201680062 2 19.4487072257173 21.145496199861814 33.19029782901197 26.215498745408922 3 20.37455907487545 22.828466489690534 29.448343576130043 27.348630859303974 4 14.19978908323939 16.207134804901997 33.65431470235281 35.9387614095058 5 15.045638023200844 36.307502090985125 32.45936215862395 16.187497727190078 6 32.933561220408016 34.1816066038765 16.795519837084985 16.089312338630496 7 29.355249281792066 30.47383541219681 20.554929270155277 19.615986035855848 8 29.181424779082874 31.161860431288414 19.639259609440344 20.01745518018837 9 27.6700970944398 14.366340594203425 19.638532310265827 38.32503000109095 10 19.461071311684062 25.68893414305975 29.798174479071964 25.051820066184227 11 35.946034401250955 22.401541874249972 20.096003491036036 21.556420233463037 12 22.978290119640715 26.59223971780792 26.654060147641733 23.775410014909635 13 30.33128477399178 18.716316956980254 25.716571511691335 25.235826757336632 14 23.22775373649951 20.93894323429943 24.53761954980181 31.29568347939925 15 26.825702752827375 26.55223826320957 21.916433324848175 24.705625659114876 16 25.6962071348049 25.336194043419763 24.11069493436125 24.856903887414088 17 24.049601803701954 26.51150950943671 24.67216989708717 24.766718789774174 18 24.155787483181207 23.603767409723993 27.140623295392558 25.099821811702245 19 24.83144841630605 25.312920469835266 26.53769227971926 23.317938834139422 20 25.190734208516673 23.469217062438634 26.782792101530966 24.557256627513727 21 26.767518818866144 24.290337830466562 25.68893414305975 23.25320920760755 22 26.149314520528023 23.861958616676972 25.299829084693986 24.688897778101023 23 24.35652205534747 24.008145750754572 26.29259245790756 25.3427397359904 24 23.866322411724063 25.260554929270157 26.365322375359103 24.507800283646677 25 24.290337830466562 24.14705989308702 26.21113495036183 25.351467326084588 26 24.443070657114806 25.39219607985745 26.212589548710863 23.952143714316882 27 25.33837594094331 24.111422233535766 25.57693007018437 24.973271755336558 28 23.429215607840284 24.865631477508273 27.169715262373177 24.535437652278265 29 23.473580857485725 24.742717917015163 27.40972398996327 24.373977235535836 30 22.83210298556311 25.83512127713735 27.5100912760464 23.822684461253136 31 24.231426597330813 25.42928833775774 26.073675406378417 24.265609658533037 32 23.364485981308412 24.683806683879414 26.718062474999094 25.233644859813083 33 23.01901887341358 24.323793592494273 27.11007673006291 25.547110804029238 34 24.245245281646604 24.192879741081494 26.468598858140297 25.093276119131602 35 23.894687079530165 24.361613149569074 27.18717044256155 24.556529328339213 36 22.36008582130259 25.246008945779845 27.44827084621259 24.94563438670497 37 23.856867522455364 23.724499072693554 27.3733590312375 25.045274373613584 38 22.737554092876106 23.27357358449398 28.785046728971963 25.203825593657953 39 23.40012364085967 22.840103276482782 28.394487072257174 25.36528601040038 40 22.320084366704243 23.321575330012003 28.994508891232407 25.363831412051347 41 21.135314011418597 23.802320084366706 29.86944979817448 25.19291610604022 42 22.42554274700898 23.48885414015055 29.424342703371032 24.661260409469435 43 20.89239608713044 23.129568347939923 29.870904396523514 26.107131168406124 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 27.0 1 28.5 2 30.0 3 88.0 4 146.0 5 146.0 6 191.5 7 237.0 8 235.5 9 234.0 10 323.5 11 413.0 12 413.0 13 713.0 14 1013.0 15 1481.0 16 1949.0 17 1778.5 18 1608.0 19 1608.0 20 1753.5 21 1899.0 22 1483.0 23 1067.0 24 1140.5 25 1214.0 26 1214.0 27 1322.5 28 1431.0 29 1767.0 30 2103.0 31 2424.0 32 2745.0 33 2745.0 34 3176.0 35 3607.0 36 4213.5 37 4820.0 38 5575.0 39 6330.0 40 6330.0 41 6852.0 42 7374.0 43 7584.5 44 7795.0 45 8463.5 46 9132.0 47 9132.0 48 9952.5 49 10773.0 50 10938.0 51 11103.0 52 11013.5 53 10924.0 54 10924.0 55 10044.5 56 9165.0 57 8587.5 58 8010.0 59 7682.0 60 7354.0 61 7354.0 62 6871.5 63 6389.0 64 5957.5 65 5526.0 66 4983.0 67 4440.0 68 4440.0 69 3758.5 70 3077.0 71 2652.5 72 2228.0 73 1681.5 74 1135.0 75 1135.0 76 934.0 77 733.0 78 603.0 79 473.0 80 416.0 81 359.0 82 359.0 83 286.0 84 213.0 85 194.0 86 175.0 87 161.0 88 147.0 89 147.0 90 114.0 91 81.0 92 45.5 93 10.0 94 7.0 95 4.0 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 137495.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.67860649478163 #Duplication Level Percentage of deduplicated Percentage of total 1 88.52779906845115 54.60271282592094 2 5.235540357290254 6.45841666969708 3 1.77230116148812 3.2793919778901053 4 0.9681032957962384 2.3884504891086946 5 0.649725841636696 2.0037092257900286 6 0.44926596309179884 1.6626059129422888 7 0.3667236601615471 1.5833303029201062 8 0.2688520724013914 1.326593694316157 9 0.20045987854489714 1.1127677370086184 >10 1.4150109073757444 16.499509073057204 >50 0.114380048346206 4.8998145387104985 >100 0.028300218147514884 2.428451943707044 >500 0.0035375272684393605 1.754245608931234 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 933 0.6785701298229027 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 813 0.5912942288810502 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 666 0.48438125022728096 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 280 0.20364376886432234 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 237 0.17236990436015853 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 189 0.1374595439834176 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 161 0.11709516709698534 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 157 0.11418597039892359 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 153 0.11127677370086186 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 148 0.10764027782828466 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 148 0.10764027782828466 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 147 0.10691297865376923 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 7.27299174515437E-4 0.0 11 0.0 0.0 0.0 0.002181897523546311 0.0 12 0.0 0.0 0.0 0.002181897523546311 0.0 13 0.0 0.0 0.0 0.004363795047092622 0.0 14 0.0 0.0 0.0 0.005091094221608058 0.0 15 0.0 0.0 0.0 0.005091094221608058 0.0 16 0.0 0.0 0.0 0.0065456925706389325 0.0 17 0.0 0.0 0.0 0.00945488926870068 0.0 18 0.0 0.0 0.0 0.00945488926870068 0.0 19 0.0 0.0 0.0 0.00945488926870068 0.0 20 0.0 0.0 0.0 0.010182188443216117 0.0 21 0.0 0.0 0.0 0.013091385141277865 0.0 22 0.0 0.0 0.0 0.023273573584493983 0.0 23 0.0 0.0 0.0 0.029819266155132914 0.0 24 0.0 0.0 0.0 0.046547147168987967 0.0 25 0.0 0.0 0.0 0.05163824139059602 0.0 26 0.0 0.0 0.0 0.07054801992799738 0.0 27 0.0 0.0 0.0 0.12436815884213971 0.0 28 0.0 0.0 0.0 0.2894650714571439 0.0 29 0.0 0.0 0.0 0.5120186188588676 0.0 30 0.0 0.0 0.0 0.7927561002218263 0.0 31 0.0 0.0 0.0 1.4022328084657625 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 185 0.0 21.000002 37 GCGCGCA 45 0.003808952 20.555555 20 GGTATCA 450 0.0 20.555555 1 TCTCTGT 50 0.0070041823 18.5 34 AAAGTTG 90 2.1243104E-6 18.5 28 CAGGGCT 50 0.0070041823 18.5 4 ACCATCG 75 2.050634E-4 17.266666 21 AGTTGAT 75 2.050634E-4 17.266666 30 GGCGACT 75 2.050634E-4 17.266666 14 CATCGAA 90 4.400323E-5 16.444445 23 GCGACTA 80 3.3555448E-4 16.1875 15 ACGGCGA 80 3.3555448E-4 16.1875 12 CCATCGA 80 3.3555448E-4 16.1875 22 AGGCCCG 70 0.0025769568 15.857143 5 CGAGCCG 70 0.0025769568 15.857143 10 AAGTTGA 105 9.223933E-6 15.857142 29 CGGACAT 95 6.9876725E-5 15.578948 21 ACATCTA 95 6.9876725E-5 15.578948 24 GACACAG 85 5.3216075E-4 15.235294 7 GAAAGTT 85 5.3216075E-4 15.235294 27 >>END_MODULE