##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631387.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1693042 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.84715441199923 34.0 33.0 34.0 31.0 34.0 2 33.02445479793177 34.0 33.0 34.0 31.0 34.0 3 33.136571922019655 34.0 33.0 34.0 31.0 34.0 4 36.46046878931533 37.0 37.0 37.0 35.0 37.0 5 36.43656507044716 37.0 37.0 37.0 35.0 37.0 6 36.478448851239364 37.0 37.0 37.0 35.0 37.0 7 36.47153407889468 37.0 37.0 37.0 35.0 37.0 8 36.4610978345487 37.0 37.0 37.0 35.0 37.0 9 38.314142236282386 39.0 39.0 39.0 37.0 39.0 10 38.28447374607364 39.0 39.0 39.0 37.0 39.0 11 38.33096934393831 39.0 39.0 39.0 37.0 39.0 12 38.1272443329817 39.0 39.0 39.0 37.0 39.0 13 38.249634681242405 39.0 39.0 39.0 37.0 39.0 14 39.77977037781697 41.0 40.0 41.0 38.0 41.0 15 39.77806043795724 41.0 40.0 41.0 38.0 41.0 16 39.74787512654736 41.0 40.0 41.0 38.0 41.0 17 39.746834986964295 41.0 40.0 41.0 38.0 41.0 18 39.72562759813401 41.0 40.0 41.0 38.0 41.0 19 39.74287170666764 41.0 40.0 41.0 38.0 41.0 20 39.70687082777628 41.0 40.0 41.0 38.0 41.0 21 39.678277325665874 41.0 40.0 41.0 37.0 41.0 22 39.619203776397754 41.0 40.0 41.0 37.0 41.0 23 39.54867983192384 41.0 40.0 41.0 37.0 41.0 24 39.517844211779746 41.0 39.0 41.0 37.0 41.0 25 39.5115472622652 41.0 39.0 41.0 37.0 41.0 26 39.43767195379677 41.0 39.0 41.0 36.0 41.0 27 39.36734115278889 41.0 39.0 41.0 36.0 41.0 28 39.26620367362416 41.0 39.0 41.0 36.0 41.0 29 39.19216416367698 41.0 39.0 41.0 35.0 41.0 30 39.13197368996162 41.0 39.0 41.0 35.0 41.0 31 39.07589829431284 41.0 39.0 41.0 35.0 41.0 32 38.98518524643807 40.0 39.0 41.0 35.0 41.0 33 38.882172444629255 40.0 38.0 41.0 35.0 41.0 34 38.84033000953313 40.0 38.0 41.0 35.0 41.0 35 38.724762291780124 40.0 38.0 41.0 35.0 41.0 36 38.66100014057537 40.0 38.0 41.0 35.0 41.0 37 38.587083486410855 40.0 38.0 41.0 35.0 41.0 38 38.48442448563001 40.0 38.0 41.0 35.0 41.0 39 38.388731053334766 40.0 38.0 41.0 35.0 41.0 40 38.28243008738117 40.0 38.0 41.0 34.0 41.0 41 38.17135251222356 40.0 37.0 41.0 34.0 41.0 42 38.04405147657294 40.0 37.0 41.0 34.0 41.0 43 37.12514692488432 39.0 35.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 1.0 12 6.0 13 3.0 14 0.0 15 5.0 16 7.0 17 39.0 18 57.0 19 76.0 20 171.0 21 301.0 22 462.0 23 777.0 24 1212.0 25 1833.0 26 2631.0 27 3736.0 28 5354.0 29 7789.0 30 10311.0 31 13508.0 32 17628.0 33 23766.0 34 35495.0 35 52075.0 36 83891.0 37 161794.0 38 348828.0 39 921285.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.49691265780766 17.748880417615158 12.2497256417738 26.504481282803383 2 19.673404440055236 19.941442681280204 32.88518536456863 27.49996751409593 3 20.381301822400154 21.43780248806586 28.74293726912859 29.4379584204054 4 14.844286201996171 15.490046909645477 32.94696764758346 36.71869924077489 5 16.33763367949525 34.70486851477991 32.06506394997879 16.89243385574605 6 34.704455057819 33.50336258639774 15.996827013151474 15.795355342631783 7 30.70987016270122 29.444632797059967 19.98975808042565 19.855738959813166 8 29.09738801518214 30.62150850362838 19.468802309688716 20.812301171500767 9 27.862864595207913 13.882880637338 19.069934472978225 39.18432029447586 10 19.322084153848518 24.61935380220928 29.853128274431466 26.205433769510737 11 37.581229526497275 21.14401178470469 19.780844184609712 21.493914504188318 12 23.63508997414122 24.842029908295245 26.48008732211014 25.04279279545339 13 31.073298831334366 17.8198768843301 24.53205531817876 26.574768966156775 14 24.179022138848296 19.95685871939385 23.133035093045535 32.73108404871232 15 27.33789238542222 25.863032340603482 20.65902676956626 26.140048504408043 16 26.83418367648292 24.575940821314532 22.705579660752655 25.88429584144989 17 25.617970493348658 25.05962640029013 23.47821259011885 25.84419051624236 18 25.798710250543106 22.73670706338059 25.330795101361925 26.13378758471438 19 25.909752977185445 24.170693934350123 24.614687645079094 25.30486544338534 20 26.382924936298096 22.782305459640103 24.553850406546324 26.28091919751548 21 27.89771311048397 23.438756982992743 23.798346408417512 24.865183498105775 22 27.542907972749642 22.95164561776967 23.596874737897817 25.90857167158287 23 25.920443792888776 22.972613792215434 24.368326361661435 26.738616053234352 24 25.3133708437239 24.082036948876638 24.460409133382395 26.144183074017064 25 25.92014846648813 22.9463888078382 24.27317219537377 26.860290530299896 26 25.745078976186058 24.444284311907204 24.425915009787115 25.384721702119617 27 26.898210440142655 22.838771867443334 23.89344150942505 26.369576182988965 28 25.123062511148568 23.64808433576958 25.042851860733524 26.186001292348326 29 24.731755030294583 23.852036748054687 25.427248703812428 25.988959517838307 30 24.273231260653898 24.796608707876118 25.550577008721582 25.379583022748402 31 25.80449864799574 24.131592718904788 23.949021938026345 26.11488669507313 32 24.780129494720153 23.549090926273536 24.746875742007582 26.92390383699873 33 24.33855746047647 23.218384422831804 25.505037677742195 26.938020438949533 34 25.813712831695845 23.04343306308999 25.125188861233212 26.017665243980954 35 25.522166608979575 22.97917003830974 26.08133761595991 25.417325736750772 36 23.83030072496725 23.72297911097303 25.894691330752572 26.552028833307144 37 24.942145558113737 22.24020431861702 26.324450308970484 26.493199814298755 38 23.890370114858346 21.654217674458167 27.535761073854044 26.919651136829447 39 24.34316455232652 21.488067041455558 27.610655849057498 26.558112557160424 40 23.46167431168276 21.941334001164766 28.301601496005414 26.29539019114706 41 22.193660877875445 22.096793818464043 29.59583991418996 26.11370538947055 42 23.214131722662522 21.905894833087423 29.22148416873297 25.658489275517088 43 21.652032259093396 21.38239925530495 29.561286725314552 27.404281760287102 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 262.0 1 223.5 2 185.0 3 555.0 4 925.0 5 925.0 6 1141.0 7 1357.0 8 1305.5 9 1254.0 10 2011.5 11 2769.0 12 2769.0 13 4589.5 14 6410.0 15 9470.5 16 12531.0 17 11519.0 18 10507.0 19 10507.0 20 11719.0 21 12931.0 22 11229.0 23 9527.0 24 10533.5 25 11540.0 26 11540.0 27 13044.5 28 14549.0 29 17797.0 30 21045.0 31 25159.5 32 29274.0 33 29274.0 34 34718.0 35 40162.0 36 47860.0 37 55558.0 38 63002.5 39 70447.0 40 70447.0 41 76399.0 42 82351.0 43 86611.5 44 90872.0 45 97917.0 46 104962.0 47 104962.0 48 113332.5 49 121703.0 50 125338.5 51 128974.0 52 134352.0 53 139730.0 54 139730.0 55 132885.5 56 126041.0 57 120998.0 58 115955.0 59 111065.0 60 106175.0 61 106175.0 62 99905.0 63 93635.0 64 87211.0 65 80787.0 66 72280.5 67 63774.0 68 63774.0 69 54901.0 70 46028.0 71 40254.0 72 34480.0 73 27089.5 74 19699.0 75 19699.0 76 15802.0 77 11905.0 78 10046.5 79 8188.0 80 7190.0 81 6192.0 82 6192.0 83 5012.0 84 3832.0 85 3414.5 86 2997.0 87 2624.0 88 2251.0 89 2251.0 90 1645.5 91 1040.0 92 591.5 93 143.0 94 106.0 95 69.0 96 69.0 97 43.0 98 17.0 99 13.0 100 9.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1693042.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.25864063239956 #Duplication Level Percentage of deduplicated Percentage of total 1 87.49355503893949 43.97307140353132 2 6.722944028414253 6.757720558316171 3 1.9686004871700067 2.968175533003322 4 0.9376788799920586 1.8850586343244717 5 0.5275892417946042 1.3257959052437587 6 0.36512145678931873 1.1010304850371544 7 0.25257023966330716 0.8885685836774031 8 0.20694601727289197 0.8320660409939704 9 0.14640922974555035 0.6622495976743236 >10 1.0632187312140242 10.807952278186388 >50 0.15750930329058752 5.59987453342225 >100 0.1388626741889466 14.235255748142578 >500 0.013803581170412837 4.717554028096362 >1k 0.005073111028442325 3.8860036744051896 >5k 1.1797932624284475E-4 0.35962299594530533 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6065 0.3582309239818032 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4892 0.2889473503905987 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4447 0.2626633007332364 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 2776 0.1639652176378377 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 2180 0.12876231068101085 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 2077 0.12267858682773373 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 2069 0.12220606458670251 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 1941 0.1146457087302028 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1933 0.11417318648917155 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 1867 0.11027487800066389 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 1731 0.10224199990313293 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 1725 0.10188760822235951 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 5.9065280128904066E-5 0.0 0.0 0.0 3 0.0 5.9065280128904066E-5 0.0 0.0 0.0 4 0.0 5.9065280128904066E-5 0.0 0.0 0.0 5 0.0 5.9065280128904066E-5 0.0 0.0 0.0 6 0.0 5.9065280128904066E-5 0.0 0.0 0.0 7 0.0 5.9065280128904066E-5 0.0 0.0 0.0 8 0.0 5.9065280128904066E-5 0.0 0.0 0.0 9 0.0 5.9065280128904066E-5 0.0 0.0 0.0 10 0.0 5.9065280128904066E-5 0.0 0.0 0.0 11 0.0 5.9065280128904066E-5 0.0 5.9065280128904066E-5 0.0 12 0.0 5.9065280128904066E-5 0.0 2.953264006445203E-4 0.0 13 0.0 5.9065280128904066E-5 0.0 4.134569609023285E-4 0.0 14 0.0 1.1813056025780813E-4 0.0 6.497180814179447E-4 0.0 15 0.0 1.1813056025780813E-4 0.0 0.0010631750423202731 0.0 16 0.0 1.1813056025780813E-4 0.0 0.0017128931237382179 0.0 17 0.0 1.1813056025780813E-4 0.0 0.0023626112051561626 0.0 18 0.0 1.1813056025780813E-4 0.0 0.0028351334461873953 0.0 19 0.0 1.1813056025780813E-4 0.0 0.0034257862474764357 0.0 20 0.0 1.1813056025780813E-4 0.0 0.0037801779282498602 0.0 21 0.0 1.1813056025780813E-4 0.0 0.004488961289796709 0.0 22 0.0 1.1813056025780813E-4 0.0 0.005906528012890407 0.0 23 0.0 1.1813056025780813E-4 0.0 0.008032878097530952 0.0 24 0.0 1.1813056025780813E-4 0.0 0.012580904667456566 0.0 25 0.0 1.1813056025780813E-4 0.0 0.016242952035448618 0.0 26 0.0 1.1813056025780813E-4 0.0 0.025693396856073268 5.9065280128904066E-5 27 0.0 1.1813056025780813E-4 0.0 0.06957889999184899 5.9065280128904066E-5 28 0.0 1.1813056025780813E-4 0.0 0.23295346482839766 5.9065280128904066E-5 29 0.0 1.1813056025780813E-4 0.0 0.44109951200265557 5.9065280128904066E-5 30 0.0 1.1813056025780813E-4 0.0 0.7282749039893871 5.9065280128904066E-5 31 0.0 1.1813056025780813E-4 0.0 1.3892744539119526 5.9065280128904066E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2790 0.0 21.284946 1 GTACTAA 75 9.270021E-6 19.733332 1 GGACCGT 105 2.2613676E-8 19.380953 6 CGCATTG 50 0.007036225 18.499998 12 GCAGTCG 745 0.0 18.37584 9 ATACACA 565 0.0 18.00885 37 AGTCGGT 720 0.0 17.98611 11 TAGGGGT 135 1.1532393E-9 17.814816 4 GCTTAGA 95 3.6084257E-6 17.526316 1 TCGTTTA 435 0.0 17.011496 30 TTAGAAC 120 1.0420263E-7 16.958334 3 CAGTCGG 775 0.0 16.948385 10 TAGCACT 110 7.8129597E-7 16.818182 4 TCGGTGA 790 0.0 16.392405 13 CTTATAC 2365 0.0 16.348837 37 CGCCTTA 650 0.0 16.223076 25 CTCTATG 1170 0.0 16.128204 1 GCCTTAT 655 0.0 16.099237 26 GTTCAAA 660 0.0 15.977273 1 ATTAGAG 455 0.0 15.857142 3 >>END_MODULE