FastQCFastQC Report
Fri 10 Feb 2017
ERR1631372.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631372.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2286
Sequences flagged as poor quality0
Sequence length43
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAG60.26246719160104987No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT60.26246719160104987No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT50.21872265966754156No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA50.21872265966754156No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT40.17497812773403326No Hit
CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTG40.17497812773403326No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTTAGCT40.17497812773403326No Hit
CAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGG40.17497812773403326No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC40.17497812773403326No Hit
CTATCAATCTGTCAATCCTGTCCGTGTCCGGGCCGGGTGAGGT30.13123359580052493No Hit
GAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATG30.13123359580052493No Hit
ATTCCTAGCTGCGGTATCCAGGCGGCTCGGGCCTGCTTTGAAC30.13123359580052493No Hit
GCTAAGAGCATCGAGGGGGCGCCGAGAGGCAAGGGGCGGGGAC30.13123359580052493No Hit
GCGTTATTCCCATGACCCGCCGGGCAGCTTCCGGGAAACCAAA30.13123359580052493No Hit
GTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGA30.13123359580052493No Hit
GGGCAGACGTTCGAATGGGTCGTCGCCGCCACGGGGGGCGTGC30.13123359580052493No Hit
GTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACAC30.13123359580052493No Hit
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAAC30.13123359580052493No Hit
CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGC30.13123359580052493No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC30.13123359580052493No Hit
TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACC30.13123359580052493No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)