ERR1631360.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631360.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	110683
Sequences flagged as poor quality	0
Sequence length	43
%GC	57

Per base quality graph

Per Sequence quality graph

$Per sequence GC content graph$

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	173	0.15630223250182956	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	137	0.12377691244364536	No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC	136	0.12287343133091802	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	131	0.11835602576728134	No Hit
GGTCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAT	130	0.117452544654554	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	124	0.11203165797818997	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	122	0.11022469575273529	No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATAC	113	0.10209336573818925	No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT	112	0.10118988462546191	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	112	0.10118988462546191	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCTATG	35	8.818626E-4	26.42857	1
TCTATGG	35	8.818626E-4	26.42857	2
TATACAC	80	9.549694E-10	25.4375	37
ACGGCTA	40	0.001920238	23.125	24
ACAGAGG	40	0.001920238	23.125	8
CGGCTAC	40	0.001920238	23.125	25
TACCGGC	40	0.001920238	23.125	2
GGTATCA	65	2.6466496E-6	22.769228	1
TACCACA	50	2.6807789E-4	22.199999	29
TAAGGGC	60	3.687264E-5	21.583334	29
TCCATTG	70	5.0335184E-6	21.142857	2
CATTGGA	80	6.843911E-7	20.8125	4
CGTGCGT	45	0.003804323	20.555557	9
TTAGACA	45	0.003804323	20.555557	18
AAACGGC	45	0.003804323	20.555557	22
ACCACAT	45	0.003804323	20.555557	30
TGAGAAA	45	0.003804323	20.555557	18
CTCAGGA	45	0.003804323	20.555557	2
ATCTAAG	65	6.830365E-5	19.923075	26
CATCTAA	65	6.830365E-5	19.923075	25