FastQCFastQC Report
Fri 10 Feb 2017
ERR1631337.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631337.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7040
Sequences flagged as poor quality0
Sequence length43
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA350.4971590909090909No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC200.2840909090909091No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC200.2840909090909091No Hit
GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC160.22727272727272727No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC160.22727272727272727No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC150.2130681818181818No Hit
GAATAGGACCGCGGTTCTATTTTGTTGGTTTTCGGAACTGAGG140.19886363636363635No Hit
GTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTG130.1846590909090909No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGG130.1846590909090909No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC130.1846590909090909No Hit
AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC120.17045454545454544No Hit
CGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCT120.17045454545454544No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTCTGTC120.17045454545454544No Hit
GGCTCAGCGTGTGCCTACCCTACGCCGGCAGGCGCGGGTAACC120.17045454545454544No Hit
TCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGCAA110.15625No Hit
GAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGC110.15625No Hit
GAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGG110.15625No Hit
TAACAGGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGC110.15625No Hit
GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGC100.14204545454545456No Hit
CGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACCTGT100.14204545454545456No Hit
GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATAC90.1278409090909091No Hit
CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTG90.1278409090909091No Hit
GGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACTAGT90.1278409090909091No Hit
GGTTACCCGCGCCTGCCGGCGTAGGGTAGGCACACGCTGAGCC90.1278409090909091No Hit
GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT90.1278409090909091No Hit
CTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCTT90.1278409090909091No Hit
AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGCTGTC90.1278409090909091No Hit
TCACTGTACCGGCCGTGCGTACTTAGACATGCATGGCTTAATC80.11363636363636363No Hit
ATTCGAACGTCTGCCCTATCAACTTTCGATGGTAGTCGCCGTG80.11363636363636363No Hit
CCCCGATCCCCATCACGAATGGGGTTCAACGGGTTACCCGCGC80.11363636363636363No Hit
TCCCCGCCCCTTGCCTCTCGGCGCCCCCTCGATGCTCTTAGCT80.11363636363636363No Hit
GTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGA80.11363636363636363No Hit
CTCTTAATCATGGCCTCAGTTCCGAAAACCAACAAAATAGAAC80.11363636363636363No Hit
AGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGG80.11363636363636363No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)