##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631330.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 861946 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.82668287804572 34.0 31.0 34.0 31.0 34.0 2 32.99611692611834 34.0 33.0 34.0 31.0 34.0 3 33.11010434528381 34.0 33.0 34.0 31.0 34.0 4 36.446532613411975 37.0 37.0 37.0 35.0 37.0 5 36.42282695203644 37.0 37.0 37.0 35.0 37.0 6 36.46400818612767 37.0 37.0 37.0 35.0 37.0 7 36.44719506790449 37.0 37.0 37.0 35.0 37.0 8 36.43659811635532 37.0 37.0 37.0 35.0 37.0 9 38.2922491664211 39.0 39.0 39.0 37.0 39.0 10 38.24935668823801 39.0 39.0 39.0 37.0 39.0 11 38.310869822471474 39.0 39.0 39.0 37.0 39.0 12 38.08264786889202 39.0 39.0 39.0 37.0 39.0 13 38.21298434008627 39.0 39.0 39.0 37.0 39.0 14 39.72558373726428 41.0 40.0 41.0 38.0 41.0 15 39.7295282999167 41.0 40.0 41.0 38.0 41.0 16 39.70826826738566 41.0 40.0 41.0 38.0 41.0 17 39.69206075554617 41.0 40.0 41.0 37.0 41.0 18 39.677623656238325 41.0 40.0 41.0 37.0 41.0 19 39.68569724785544 41.0 40.0 41.0 37.0 41.0 20 39.66094627737701 41.0 40.0 41.0 37.0 41.0 21 39.63049657403132 41.0 40.0 41.0 37.0 41.0 22 39.57829492798853 41.0 40.0 41.0 37.0 41.0 23 39.50320901773429 41.0 39.0 41.0 37.0 41.0 24 39.462996521823875 41.0 39.0 41.0 37.0 41.0 25 39.44110187877199 41.0 39.0 41.0 37.0 41.0 26 39.366584449605895 41.0 39.0 41.0 36.0 41.0 27 39.287005218424355 41.0 39.0 41.0 36.0 41.0 28 39.17908314441972 41.0 39.0 41.0 36.0 41.0 29 39.094572049757176 41.0 39.0 41.0 35.0 41.0 30 39.02677313892053 40.0 39.0 41.0 35.0 41.0 31 38.957438168980424 40.0 39.0 41.0 35.0 41.0 32 38.8739781842482 40.0 38.0 41.0 35.0 41.0 33 38.759056831866495 40.0 38.0 41.0 35.0 41.0 34 38.7055128743564 40.0 38.0 41.0 35.0 41.0 35 38.587100584027304 40.0 38.0 41.0 35.0 41.0 36 38.516875767159426 40.0 38.0 41.0 35.0 41.0 37 38.43903446387593 40.0 38.0 41.0 35.0 41.0 38 38.3439275778297 40.0 38.0 41.0 34.0 41.0 39 38.23868200560128 40.0 37.0 41.0 34.0 41.0 40 38.12317128915269 40.0 37.0 41.0 34.0 41.0 41 38.017356075670634 40.0 37.0 41.0 34.0 41.0 42 37.88596385388412 40.0 37.0 41.0 34.0 41.0 43 36.905088021755425 39.0 35.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 1.0 11 0.0 12 1.0 13 3.0 14 2.0 15 2.0 16 2.0 17 12.0 18 20.0 19 30.0 20 71.0 21 147.0 22 244.0 23 451.0 24 630.0 25 1038.0 26 1413.0 27 2133.0 28 2908.0 29 4066.0 30 5345.0 31 7148.0 32 9261.0 33 12724.0 34 18965.0 35 27825.0 36 45948.0 37 87502.0 38 191741.0 39 442312.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.71747186018614 17.29273063509779 11.976736361674629 27.013061143041444 2 20.537945532550765 19.130664798026793 32.31698969541015 28.014399974012292 3 20.964422365206172 20.305564385703978 27.95488348458024 30.77512976450961 4 15.2214871929332 15.026695407832975 32.10607161005446 37.64574578917937 5 17.341573602058595 33.804437865017064 31.32655642000775 17.527432112916586 6 36.19437876618721 32.46467876177858 15.272998540511818 16.06794393152239 7 31.857912212598006 28.312678520464157 19.131476913866994 20.69793235307084 8 29.908254113366727 30.043877458680708 18.51090439540296 21.5369640325496 9 28.087606416179206 13.327749070127362 18.307179336060493 40.27746517763294 10 19.74334819118599 23.927368999914147 29.085000684497636 27.244282124402226 11 39.16347427797101 20.271919586609837 18.80048170070979 21.764124434709366 12 24.212305643276956 24.07888661238639 25.498349084513418 26.21045865982324 13 32.613644010181616 17.094458353539547 22.981254046077133 27.310643590201707 14 24.775333953635144 19.105257173883285 22.055790037891004 34.063618834590564 15 28.317667232053978 24.91559796089314 19.795787671153413 26.970947135899465 16 27.988992349868784 23.389864330248066 21.763196302320566 26.857947017562584 17 26.51743844742014 23.896624614535018 22.55872177607414 27.0272151619707 18 26.711882182874565 21.68268081759182 24.18991444939706 27.41552255013655 19 27.188478164525385 23.509709424952373 23.19565262789084 26.106159782631394 20 27.557642822172156 21.989428572091523 23.30621639870711 27.14671220702921 21 29.04277066080706 22.583781350571847 22.572295712260395 25.8011522763607 22 28.999264455081875 21.89870363108594 22.19234151559378 26.909690398238407 23 27.08023472468113 22.05242555798159 23.00144092553362 27.865898791803662 24 26.538669475814032 23.076851682123937 22.99946864420741 27.38501019785462 25 26.96746663944145 21.985367992890506 22.98786698934736 28.059298378320683 26 27.154833365431248 23.11038046466948 22.969768407765685 26.765017762133592 27 27.705099855443382 22.034442992948513 22.70757100792857 27.552886143679533 28 26.36197627229548 22.65768389203036 23.787453042301955 27.192886793372207 29 26.148389806321976 22.878579400565695 24.257900146876953 26.71513064623538 30 25.599747547990248 23.470147781879607 24.208825146818942 26.721279523311203 31 26.808639984407378 22.939952154775355 22.6916767407703 27.559731120046965 32 25.783401744424822 22.555473312713325 23.657630524418003 28.003494418443847 33 25.41493318606966 22.143150498987175 24.43958206198532 28.002334252957844 34 26.962593944400233 21.883853512865077 24.166479106579764 26.987073436154933 35 26.590528873038448 21.927591751687462 24.737628575339986 26.744250799934104 36 24.999593942079898 22.642137674517894 24.64446728681379 27.71380109658842 37 25.604388209934264 21.174992400916068 25.788738505660447 27.431880883489224 38 24.62996521823873 20.519962967517685 26.63264288018043 28.217428934063154 39 24.734612145076373 20.333872423562497 27.466105765326365 27.465409666034763 40 24.249895005023518 20.56300510704847 27.80208969007339 27.38501019785462 41 22.949465511760597 20.79956284964487 29.258097375009573 26.99287426358496 42 23.292874495618054 21.030667814457054 29.045090991779066 26.631366698145825 43 22.096395829901176 20.221916454163022 29.315757599664018 28.365930116271787 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 25.0 2 36.0 3 108.5 4 181.0 5 181.0 6 231.5 7 282.0 8 298.5 9 315.0 10 478.0 11 641.0 12 641.0 13 1212.5 14 1784.0 15 3046.0 16 4308.0 17 3879.5 18 3451.0 19 3451.0 20 3890.0 21 4329.0 22 3644.5 23 2960.0 24 3352.0 25 3744.0 26 3744.0 27 4337.0 28 4930.0 29 6180.0 30 7430.0 31 9141.5 32 10853.0 33 10853.0 34 13942.5 35 17032.0 36 20806.5 37 24581.0 38 28040.0 39 31499.0 40 31499.0 41 34581.5 42 37664.0 43 40821.0 44 43978.0 45 47353.5 46 50729.0 47 50729.0 48 55461.0 49 60193.0 50 61923.5 51 63654.0 52 65731.5 53 67809.0 54 67809.0 55 66523.5 56 65238.0 57 63559.0 58 61880.0 59 61791.0 60 61702.0 61 61702.0 62 59044.0 63 56386.0 64 52122.0 65 47858.0 66 43438.0 67 39018.0 68 39018.0 69 34143.5 70 29269.0 71 25898.0 72 22527.0 73 17922.5 74 13318.0 75 13318.0 76 10480.0 77 7642.0 78 6443.5 79 5245.0 80 4513.0 81 3781.0 82 3781.0 83 3048.0 84 2315.0 85 1979.0 86 1643.0 87 1347.0 88 1051.0 89 1051.0 90 778.0 91 505.0 92 307.0 93 109.0 94 78.0 95 47.0 96 47.0 97 29.0 98 11.0 99 7.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 861946.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.192146799057866 #Duplication Level Percentage of deduplicated Percentage of total 1 89.12267023333912 52.75362179575834 2 5.936868303104141 7.028319602480278 3 1.6407345474085164 2.91355800565472 4 0.7689453748860122 1.8206211004283768 5 0.4623357427122767 1.3683322576538264 6 0.3234806259877177 1.1488507620069672 7 0.22269451592146738 0.9227236534438037 8 0.18261513631725343 0.8647505565296664 9 0.12604210885071518 0.6714632708958927 >10 0.9823336179311585 11.630432226771575 >50 0.13098105873878266 5.391256817352296 >100 0.09498880178753867 10.906779042010829 >500 0.003933283715064591 1.414844144430644 >1k 0.0013766493002726067 1.1644467645828316 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2272 0.2635895984203187 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1857 0.21544273075111434 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1505 0.17460490564374104 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 1267 0.14699296707682383 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 1053 0.12216542567631847 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 1028 0.11926501196130616 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 1021 0.11845289612110273 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.1601654860049238E-4 0.0 0.0 0.0 3 0.0 1.1601654860049238E-4 0.0 0.0 0.0 4 0.0 1.1601654860049238E-4 0.0 0.0 0.0 5 0.0 1.1601654860049238E-4 0.0 0.0 0.0 6 0.0 1.1601654860049238E-4 0.0 0.0 0.0 7 0.0 1.1601654860049238E-4 0.0 0.0 0.0 8 0.0 1.1601654860049238E-4 0.0 0.0 0.0 9 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.0 0.0 10 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.0 0.0 11 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.0 0.0 12 0.0 1.1601654860049238E-4 1.1601654860049238E-4 1.1601654860049238E-4 0.0 13 0.0 1.1601654860049238E-4 1.1601654860049238E-4 1.1601654860049238E-4 0.0 14 0.0 1.1601654860049238E-4 1.1601654860049238E-4 1.1601654860049238E-4 0.0 15 0.0 1.1601654860049238E-4 1.1601654860049238E-4 2.3203309720098476E-4 0.0 16 0.0 1.1601654860049238E-4 1.1601654860049238E-4 9.28132388803939E-4 0.0 17 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.0016242316804068932 0.0 18 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.0016242316804068932 0.0 19 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.001856264777607878 0.0 20 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.002204314423409355 0.0 21 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.003132446812213294 0.0 22 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.004292612298218218 0.0 23 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.006612943270228065 0.0 24 0.0 1.1601654860049238E-4 1.1601654860049238E-4 0.009745390082441359 0.0 25 0.0 2.3203309720098476E-4 1.1601654860049238E-4 0.012877836894654654 0.0 26 0.0 2.3203309720098476E-4 1.1601654860049238E-4 0.020070862907885182 0.0 27 0.0 2.3203309720098476E-4 1.1601654860049238E-4 0.05359964545342748 0.0 28 0.0 2.3203309720098476E-4 1.1601654860049238E-4 0.20012854633584934 0.0 29 0.0 2.3203309720098476E-4 1.1601654860049238E-4 0.410234515851341 0.0 30 0.0 2.3203309720098476E-4 1.1601654860049238E-4 0.6641947407378188 0.0 31 0.0 2.3203309720098476E-4 1.1601654860049238E-4 1.4017119401911489 1.1601654860049238E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1290 0.0 22.085272 1 TAGGGGT 60 3.7248945E-5 21.583332 4 TACTGTG 95 7.1395334E-9 21.421053 7 GAATATA 45 0.0038250436 20.555555 1 TACGAGG 45 0.0038250436 20.555555 24 TATACTG 45 0.0038250436 20.555555 5 TCTAGAT 170 0.0 19.588234 2 ATACACA 275 0.0 18.836365 37 CTTATAC 1260 0.0 18.646826 37 TAGATAA 190 0.0 17.526316 4 GCAGTCG 455 0.0 17.483517 9 CTAGATA 195 0.0 17.076923 3 GTAAGAT 65 0.0015795003 17.076923 3 CGCCTTA 315 0.0 17.031746 25 CTCTATG 580 0.0 16.905172 1 CAGTCGG 475 0.0 16.747368 10 AGTCGGT 450 0.0 16.444445 11 TCTATGG 605 0.0 16.206612 2 CTTATTG 470 0.0 15.744679 28 TCGGTGA 475 0.0 15.578947 13 >>END_MODULE