##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631308.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1042047 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.056086721616204 34.0 33.0 34.0 31.0 34.0 2 33.19885667345139 34.0 33.0 34.0 31.0 34.0 3 33.2740788083455 34.0 34.0 34.0 31.0 34.0 4 36.49286644460375 37.0 37.0 37.0 35.0 37.0 5 36.498840263443014 37.0 37.0 37.0 35.0 37.0 6 36.564268214389564 37.0 37.0 37.0 35.0 37.0 7 36.56679785076873 37.0 37.0 37.0 35.0 37.0 8 36.56663566998417 37.0 37.0 37.0 35.0 37.0 9 38.41473849068228 39.0 39.0 39.0 37.0 39.0 10 38.37325955547111 39.0 39.0 39.0 37.0 39.0 11 38.44091965141688 39.0 39.0 39.0 37.0 39.0 12 38.39766056617408 39.0 39.0 39.0 37.0 39.0 13 38.422450234970206 39.0 39.0 39.0 37.0 39.0 14 39.96127717847659 41.0 40.0 41.0 38.0 41.0 15 39.95240809675571 41.0 40.0 41.0 38.0 41.0 16 39.90726234037428 41.0 40.0 41.0 38.0 41.0 17 39.893820528248725 41.0 40.0 41.0 38.0 41.0 18 39.890906072374854 41.0 40.0 41.0 38.0 41.0 19 39.91827336003079 41.0 40.0 41.0 38.0 41.0 20 39.908115468880005 41.0 40.0 41.0 38.0 41.0 21 39.87808419389912 41.0 40.0 41.0 38.0 41.0 22 39.8232018325469 41.0 40.0 41.0 38.0 41.0 23 39.75209947344026 41.0 40.0 41.0 38.0 41.0 24 39.73079333273835 41.0 40.0 41.0 37.0 41.0 25 39.70161806521203 41.0 40.0 41.0 37.0 41.0 26 39.61897304056343 41.0 40.0 41.0 37.0 41.0 27 39.549170047032426 41.0 40.0 41.0 37.0 41.0 28 39.46221235702421 41.0 39.0 41.0 36.0 41.0 29 39.39557332826638 41.0 39.0 41.0 36.0 41.0 30 39.31101380264038 41.0 39.0 41.0 36.0 41.0 31 39.23889805354269 41.0 39.0 41.0 35.0 41.0 32 39.14986752037096 41.0 39.0 41.0 35.0 41.0 33 39.04099143320791 41.0 39.0 41.0 35.0 41.0 34 38.97360195845293 41.0 39.0 41.0 35.0 41.0 35 38.86108400100955 41.0 39.0 41.0 35.0 41.0 36 38.781291055009994 40.0 38.0 41.0 35.0 41.0 37 38.69568647095573 40.0 38.0 41.0 35.0 41.0 38 38.59610075169354 40.0 38.0 41.0 35.0 41.0 39 38.48099845784307 40.0 38.0 41.0 35.0 41.0 40 38.36687404694798 40.0 38.0 41.0 35.0 41.0 41 38.256840622351966 40.0 37.0 41.0 35.0 41.0 42 38.10628407355906 40.0 37.0 41.0 34.0 41.0 43 37.277338738079955 40.0 35.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 1.0 11 2.0 12 2.0 13 1.0 14 0.0 15 5.0 16 7.0 17 10.0 18 10.0 19 32.0 20 61.0 21 130.0 22 267.0 23 363.0 24 628.0 25 968.0 26 1455.0 27 1970.0 28 2938.0 29 4112.0 30 5462.0 31 6800.0 32 8687.0 33 11679.0 34 18025.0 35 27679.0 36 45738.0 37 94327.0 38 207745.0 39 602941.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.15299885705731 17.76330626161776 12.036117372824833 26.047577508500098 2 20.854049769348215 19.653815998702555 32.34566195190812 27.146472280041113 3 20.78034867909029 21.14261640789715 29.132659083515428 28.944375829497133 4 14.356838031298015 15.568011807528833 33.869009747161115 36.20614041401203 5 15.935653574167 35.19630112653268 32.477613773658966 16.390431525641358 6 34.578094846009826 33.29187647006325 16.07643417235499 16.053594511571934 7 30.428282025666785 29.90412140719181 19.462749760807334 20.20484680633407 8 30.28682967274989 29.28965776015861 19.01468935662211 21.408823210469393 9 28.062265905472593 13.003828042305193 19.055762360047098 39.87814369217511 10 19.573973150923134 24.271745900136942 29.97235249465715 26.181928454282772 11 37.74407488337858 20.933988582088908 18.81661767655394 22.505318857978576 12 23.910725715826636 25.418239292469536 25.824938798345947 24.84609619335788 13 32.774241468954855 17.65476989041761 23.101549162369835 26.4694394782577 14 24.315889782322678 19.99765845494493 22.97813822217232 32.70831354056007 15 29.246665457508154 24.723261042928005 20.49043853108353 25.539634968480307 16 27.318921315449302 23.941434503434106 22.44649233671802 26.293151844398572 17 25.23590586605019 24.619522919791525 23.350674201835425 26.79389701232286 18 25.801811242679072 21.87972327543767 25.453266503334305 26.865198978548953 19 26.048057333306463 24.102079848605676 24.510698653707557 25.3391641643803 20 27.264701112329863 21.923963122584684 24.854541109949935 25.956794655135518 21 28.888908081881144 22.60656189212195 23.437426526826524 25.067103499170386 22 28.543242291374572 22.095932333186507 23.293191190032694 26.067634185406224 23 26.743707337576904 22.27385137138728 23.856601477668473 27.125839813367342 24 26.006408540113835 23.22342466318698 24.084998085499024 26.68516871120017 25 26.380383994196038 22.495626396889968 23.81744777346895 27.306541835445042 26 26.523083891609495 23.041858956457816 23.694804552961624 26.740252598971065 27 26.82844439838126 22.162532016310205 23.85880867177776 27.150214913530775 28 25.605083072068723 22.69072316315867 24.814619686060226 26.889574078712382 29 24.974017486735242 23.253461696065532 25.468620897138038 26.303899920061184 30 24.872678487630594 24.167815847077915 25.590496397955175 25.369009267336313 31 26.246896733064823 24.259462385093954 23.43646687721379 26.05717400462743 32 25.03265207807325 23.440209510703454 24.85060654653773 26.676531864685565 33 24.735832452854815 22.588712409325108 25.51506793839433 27.160387199425745 34 26.041531715939875 22.539482384191885 25.066911569247836 26.352074330620407 35 25.63473624510219 23.132545844861124 25.44808439542554 25.784633514611144 36 24.39698017459865 24.480181796022638 24.8420656649844 26.280772364394313 37 25.559787610347712 23.409404758134713 25.17458425579652 25.856223375721054 38 24.723452972850552 22.758762320701464 26.0907617410731 26.42702296537488 39 25.03217225326689 22.674505084703473 26.12031894914529 26.173003712884352 40 24.16224987932406 22.510309035964788 26.818368077447563 26.509073007263588 41 23.15260252176725 22.82296287979333 27.560081263129206 26.464353335310207 42 23.838847959832908 22.857030441045364 27.555570909949363 25.74855068917237 43 22.72008844130831 22.190361855079473 27.778209620103507 27.31134008350871 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 20.0 1 46.0 2 72.0 3 246.5 4 421.0 5 421.0 6 542.0 7 663.0 8 624.0 9 585.0 10 848.0 11 1111.0 12 1111.0 13 2025.5 14 2940.0 15 4834.0 16 6728.0 17 6148.0 18 5568.0 19 5568.0 20 6725.5 21 7883.0 22 6215.0 23 4547.0 24 5288.0 25 6029.0 26 6029.0 27 7251.0 28 8473.0 29 10726.5 30 12980.0 31 15725.0 32 18470.0 33 18470.0 34 21940.5 35 25411.0 36 29788.0 37 34165.0 38 36899.5 39 39634.0 40 39634.0 41 44040.0 42 48446.0 43 51315.0 44 54184.0 45 57906.5 46 61629.0 47 61629.0 48 68923.0 49 76217.0 50 78150.0 51 80083.0 52 79285.0 53 78487.0 54 78487.0 55 77413.5 56 76340.0 57 74384.5 58 72429.0 59 70884.0 60 69339.0 61 69339.0 62 66451.0 63 63563.0 64 57666.5 65 51770.0 66 46770.5 67 41771.0 68 41771.0 69 36219.5 70 30668.0 71 26692.0 72 22716.0 73 17805.0 74 12894.0 75 12894.0 76 10380.5 77 7867.0 78 6775.5 79 5684.0 80 5020.0 81 4356.0 82 4356.0 83 3665.5 84 2975.0 85 2555.5 86 2136.0 87 1862.5 88 1589.0 89 1589.0 90 1223.0 91 857.0 92 559.0 93 261.0 94 166.5 95 72.0 96 72.0 97 42.0 98 12.0 99 7.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1042047.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.07333591226146 #Duplication Level Percentage of deduplicated Percentage of total 1 90.22541525521595 53.29916263194651 2 5.971182448759964 7.0547533317799465 3 1.1385580148693737 2.0177526020392826 4 0.5395965432180931 1.275030714184701 5 0.32623973583290244 0.9636034751392244 6 0.2390889312390953 0.8474268448794395 7 0.17479225091017483 0.7227892947013932 8 0.1355679549519352 0.6406761073451198 9 0.11302687486083093 0.6009187091190306 >10 0.9024051571312993 10.908308333977343 >50 0.12604983070462755 5.206327805885589 >100 0.09893453707909974 11.36850182859189 >500 0.007183365535263202 2.874939849535993 >1k 0.001959099691435419 2.219808470874537 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4060 0.3896177427697599 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3672 0.352383337795704 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2825 0.27110101559718514 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 1869 0.17935851261987223 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 1636 0.15699867664318407 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 1494 0.1433716521423698 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 1484 0.14241200252963637 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 1460 0.14010884345907623 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 1263 0.12120374608822826 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1095 0.10508163259430715 No Hit GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC 1090 0.10460180778794047 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA 1069 0.10258654360120034 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 9.596496127333988E-5 0.0 10 0.0 0.0 0.0 9.596496127333988E-5 0.0 11 0.0 0.0 0.0 9.596496127333988E-5 0.0 12 0.0 0.0 0.0 1.9192992254667975E-4 0.0 13 0.0 0.0 0.0 2.8789488382001963E-4 0.0 14 0.0 0.0 0.0 6.717547289133792E-4 0.0 15 0.0 0.0 0.0 9.596496127333988E-4 0.0 16 0.0 0.0 0.0 0.002399124031833497 0.0 17 0.0 0.0 0.0 0.0051821079087603535 0.0 18 0.0 0.0 0.0 0.005853862637673733 0.0 19 0.0 0.0 0.0 0.007197372095500491 0.0 20 0.0 0.0 0.0 0.008828776437147268 0.0 21 0.0 0.0 0.0 0.011323865430254106 0.0 22 0.0 0.0 0.0 0.018713167448301277 0.0 23 0.0 0.0 0.0 0.02994106791728204 0.0 24 0.0 0.0 0.0 0.04567932156610978 0.0 25 0.0 0.0 0.0 0.050573534591050115 0.0 26 0.0 0.0 0.0 0.0596902059120174 0.0 27 0.0 0.0 0.0 0.07705986390249192 0.0 28 0.0 0.0 0.0 0.13367919105376244 0.0 29 0.0 0.0 0.0 0.21764853216793484 0.0 30 0.0 0.0 0.0 0.3461456153129369 0.0 31 0.0 0.0 0.0 0.6738659580613926 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTCTAC 40 5.9396043E-5 27.750002 1 GGTATCA 2615 0.0 21.365202 1 ACTGCGT 45 0.003825571 20.555557 8 CGTAGTA 45 0.003825571 20.555557 2 CGTTTGG 55 5.1426515E-4 20.181818 28 GTACCTA 70 1.2190585E-4 18.5 1 TTACACT 70 1.2190585E-4 18.5 4 TAATACT 235 0.0 17.319147 4 CTACGGT 75 2.0670332E-4 17.266666 27 GTTTACA 65 0.0015798005 17.076921 1 TCTGTCG 185 1.8189894E-12 17.0 8 TTGGTAA 120 1.0408985E-7 16.958332 33 GTACTAT 120 1.0408985E-7 16.958332 1 ATACCGC 340 0.0 16.867647 27 GTTCAAA 330 0.0 16.818182 1 TCTTATA 1190 0.0 16.47899 37 TACTGGT 175 1.3096724E-10 15.857143 7 TGGATAT 70 0.0025922754 15.857143 12 AGTAGTA 70 0.0025922754 15.857143 2 GTTTATA 105 9.341342E-6 15.857142 1 >>END_MODULE