ERR1631300.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631300.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	29750
Sequences flagged as poor quality	0
Sequence length	43
%GC	53

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	71	0.23865546218487396	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	68	0.2285714285714286	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	57	0.1915966386554622	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	50	0.16806722689075632	No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGG	41	0.13781512605042018	No Hit
GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC	41	0.13781512605042018	No Hit
AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC	39	0.13109243697478992	No Hit
GTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTG	38	0.12773109243697478	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	37	0.12436974789915967	No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC	36	0.12100840336134452	No Hit
CGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCT	36	0.12100840336134452	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	35	0.1176470588235294	No Hit
ACCCGAGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGT	35	0.1176470588235294	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	34	0.1142857142857143	No Hit
CTCCGGAATCGAACCCTGATTCCCCGTCACCCGTGGTCACCAT	30	0.10084033613445378	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCTTAT	25	1.2049594E-4	37.0	26
CGCCTTA	25	1.2049594E-4	37.0	25
CTCTATG	40	3.623063E-8	37.0	1
TCTATGG	40	3.623063E-8	37.0	2
AGTCGGT	35	5.389629E-7	37.0	11
CAGTCGG	40	1.5318674E-6	32.375	10
TCGGTGA	40	1.5318674E-6	32.375	13
TTATTGA	40	1.5318674E-6	32.375	29
GCAGTCG	40	1.5318674E-6	32.375	9
CGGTGAT	40	1.5318674E-6	32.375	14
CCTTATT	30	3.5166155E-4	30.833332	27
CTCGCCT	30	3.5166155E-4	30.833332	23
GATATGC	25	0.0054117744	29.6	34
TATGGGC	50	2.573379E-7	29.6	4
GGTGATT	45	3.8385824E-6	28.777779	15
TGATTCC	45	3.8385824E-6	28.777779	17
CTTATTG	45	3.8385824E-6	28.777779	28
GTGATTC	45	3.8385824E-6	28.777779	16
GATTCCT	45	3.8385824E-6	28.777779	18
ATTCCTC	45	3.8385824E-6	28.777779	19