FastQCFastQC Report
Fri 10 Feb 2017
ERR1631275.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631275.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8744
Sequences flagged as poor quality0
Sequence length43
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC120.1372369624885636No Hit
CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA120.1372369624885636No Hit
TCTCCGAGCCCACGAGACTAAGGCGAATCTCGTATGCCGTCTT120.1372369624885636RNA PCR Primer, Index 46 (95% over 21bp)
GCCTAAAAGCAGCCACCAATTAAGAAAGCGTTCAAGCTCAACA110.12580054894784995No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG90.10292772186642268No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)