ERR1631266.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631266.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	235875
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	467	0.19798622151563328	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	356	0.1509273979862215	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	335	0.14202437731849496	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	325	0.1377848436671966	No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC	296	0.12549019607843137	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	285	0.12082670906200317	No Hit
GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC	277	0.1174350821409645	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTCTGTC	248	0.10514043455219926	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGCTA	25	0.0054875994	29.6	16
GTAGACC	25	0.0054875994	29.6	26
TTAATAT	35	8.8484236E-4	26.42857	3
ATATACG	35	8.8484236E-4	26.42857	6
TATACGC	35	8.8484236E-4	26.42857	7
ATACACA	35	8.8484236E-4	26.42857	37
GGTATCA	115	0.0	25.73913	1
GTAATGT	40	0.0019266644	23.125	4
TACGCTA	40	0.0019266644	23.125	9
ATACGCT	40	0.0019266644	23.125	8
TAATATA	50	2.693288E-4	22.2	4
GCGCAAG	80	6.911978E-7	20.8125	1
CGTATTG	45	0.0038169324	20.555557	27
TTACTAC	45	0.0038169324	20.555557	25
AATATAC	45	0.0038169324	20.555557	5
AAGACGG	55	5.126454E-4	20.181818	5
AAGCATT	55	5.126454E-4	20.181818	22
AGGGACG	55	5.126454E-4	20.181818	8
ACCGCAG	65	6.872448E-5	19.923077	29
ATACCGC	65	6.872448E-5	19.923077	27