##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631259.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1840639 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 33.07405960647362 34.0 33.0 34.0 31.0 34.0 2 33.21263430797674 34.0 33.0 34.0 31.0 34.0 3 33.29982305058189 34.0 34.0 34.0 31.0 34.0 4 36.52220125728076 37.0 37.0 37.0 35.0 37.0 5 36.509095482601424 37.0 37.0 37.0 35.0 37.0 6 36.55957632104938 37.0 37.0 37.0 35.0 37.0 7 36.56508527744984 37.0 37.0 37.0 35.0 37.0 8 36.56348528961953 37.0 37.0 37.0 35.0 37.0 9 38.41585992690582 39.0 39.0 39.0 37.0 39.0 10 38.380581960938564 39.0 39.0 39.0 37.0 39.0 11 38.43132575154607 39.0 39.0 39.0 37.0 39.0 12 38.38876987828684 39.0 39.0 39.0 37.0 39.0 13 38.41446095622227 39.0 39.0 39.0 37.0 39.0 14 39.968030124320954 41.0 40.0 41.0 38.0 41.0 15 39.96150575968454 41.0 40.0 41.0 38.0 41.0 16 39.934163081408144 41.0 40.0 41.0 38.0 41.0 17 39.922762149449184 41.0 40.0 41.0 38.0 41.0 18 39.896740751445556 41.0 40.0 41.0 38.0 41.0 19 39.912348917957296 41.0 40.0 41.0 38.0 41.0 20 39.8776636809282 41.0 40.0 41.0 38.0 41.0 21 39.85175039755215 41.0 40.0 41.0 38.0 41.0 22 39.797330709606825 41.0 40.0 41.0 38.0 41.0 23 39.73686475186063 41.0 40.0 41.0 38.0 41.0 24 39.71336856385201 41.0 40.0 41.0 37.0 41.0 25 39.7013939180904 41.0 40.0 41.0 37.0 41.0 26 39.60479702972717 41.0 40.0 41.0 37.0 41.0 27 39.55894556184021 41.0 40.0 41.0 37.0 41.0 28 39.48869821839046 41.0 40.0 41.0 37.0 41.0 29 39.440125412967994 41.0 39.0 41.0 36.0 41.0 30 39.371144477542856 41.0 39.0 41.0 36.0 41.0 31 39.31904083310198 41.0 39.0 41.0 35.0 41.0 32 39.25177995250562 41.0 39.0 41.0 35.0 41.0 33 39.17547058385702 41.0 39.0 41.0 35.0 41.0 34 39.12256993359372 41.0 39.0 41.0 35.0 41.0 35 39.025202117308176 41.0 39.0 41.0 35.0 41.0 36 38.96177957763581 41.0 39.0 41.0 35.0 41.0 37 38.90245452801989 41.0 39.0 41.0 35.0 41.0 38 38.82065956442301 40.0 38.0 41.0 35.0 41.0 39 38.73732491813984 40.0 38.0 41.0 35.0 41.0 40 38.638048525539226 40.0 38.0 41.0 35.0 41.0 41 38.5495194875258 40.0 38.0 41.0 35.0 41.0 42 38.41996773946439 40.0 38.0 41.0 35.0 41.0 43 37.623284631043894 40.0 36.0 41.0 33.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 3.0 13 0.0 14 6.0 15 3.0 16 4.0 17 13.0 18 26.0 19 63.0 20 107.0 21 223.0 22 375.0 23 605.0 24 1040.0 25 1573.0 26 2314.0 27 3330.0 28 4755.0 29 6617.0 30 8838.0 31 11542.0 32 15457.0 33 20485.0 34 31119.0 35 46330.0 36 76664.0 37 150320.0 38 343553.0 39 1115271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.337286670553 17.752476178109884 11.966224773027195 26.94401237830992 2 19.45911175412452 19.49649007763065 33.297295124138955 27.74710304410588 3 19.970836215031845 21.32330131003418 28.59403717947952 30.11182529545446 4 14.653335064616147 15.154411049640911 33.403562567130216 36.78869131861272 5 16.5476771925402 34.35301544735279 32.32600200256541 16.77330535754159 6 35.192071883731685 33.961955603461625 15.464194771489684 15.38177774131701 7 31.14385819272546 29.10445774538082 20.145884119591077 19.605799942302646 8 28.77321408489117 31.29527300030044 19.23717795830687 20.69433495650152 9 27.62214643936155 13.898814487794727 18.98791669632122 39.491122376522505 10 19.004921660358168 24.55625464852152 30.30186799258301 26.1369556985373 11 38.40361961253673 20.53515110784896 20.08509001493503 20.97613926467928 12 23.728281319693867 24.444336993837464 26.770540013549642 25.056841672919024 13 31.231708118756586 17.835219182034066 23.767343840916116 27.165728858293235 14 23.93614391523813 19.555436997694823 23.30484141648634 33.20357767058071 15 27.15806847513282 25.738996076905902 20.719597922243306 26.38333752571797 16 26.929343559492114 24.357682304895203 22.497839065672302 26.215135069940388 17 25.632945949748976 24.83800462774069 23.545464374057055 25.983585048453286 18 25.93436301197573 23.101053492835913 24.892985533828195 26.071597961360162 19 26.282883281295245 23.89327836691497 24.37506757164224 25.448770780147544 20 26.427778613840086 23.081984028372755 24.18312336096323 26.30711399682393 21 27.83783240494198 23.53563083255326 23.66362985897832 24.962906903526438 22 27.40988319817194 23.140279000933912 23.542313294459152 25.907524506434992 23 25.999068801649862 23.035261123990093 24.26054212694613 26.705127947413914 24 25.854119140146437 24.04349793740109 23.70752765751459 26.394855264937885 25 26.135325829779767 23.012660277218945 24.058981690597665 26.793032202403623 26 25.962505412522496 24.16508614671318 24.25326204649581 25.619146394268512 27 26.563003391756883 23.25670595918048 23.67324608464778 26.507044564414855 28 25.474142403806503 23.674278334860883 24.768735205545468 26.082844055787145 29 25.38178317421287 23.82944184057819 24.915206077889255 25.873568907319687 30 25.014193440430198 24.212189353805933 24.957419678709407 25.816197527054463 31 26.047530232707228 23.82629076098029 23.853455240272538 26.272723766039945 32 25.01011876853636 23.41203245177354 24.323835363697064 27.254013415993033 33 24.64823357540506 23.00739036823625 25.355542287216558 26.98883376914213 34 25.97657661279588 22.802081233745454 25.107747907112692 26.113594246345972 35 25.86042129934224 22.947139553166046 25.50712008166729 25.685319065824423 36 24.757217466325553 23.39855887004459 25.217764048246288 26.626459615383567 37 25.00175210891435 22.258031042480354 25.897256333262526 26.842960515342767 38 24.29580162106747 21.753858306816273 26.982640267863495 26.967699804252764 39 24.394951970484165 21.48840701517245 27.26422726020692 26.85241375413647 40 24.043334950525335 21.949931518347704 27.888629981218475 26.118103549908483 41 22.923886758891886 21.842251522433244 28.941416540668758 26.29244517800612 42 23.39725497503856 22.234289287578935 28.67373776172297 25.694717975659543 43 22.304971262697357 21.298961936588327 28.98911736630594 27.40694943440838 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 124.0 1 137.5 2 151.0 3 407.5 4 664.0 5 664.0 6 850.5 7 1037.0 8 987.0 9 937.0 10 1470.5 11 2004.0 12 2004.0 13 3263.5 14 4523.0 15 6855.5 16 9188.0 17 8393.5 18 7599.0 19 7599.0 20 8560.5 21 9522.0 22 8243.0 23 6964.0 24 8157.5 25 9351.0 26 9351.0 27 11293.0 28 13235.0 29 16660.0 30 20085.0 31 24990.5 32 29896.0 33 29896.0 34 38672.5 35 47449.0 36 57102.0 37 66755.0 38 76263.5 39 85772.0 40 85772.0 41 92679.5 42 99587.0 43 105543.5 44 111500.0 45 116041.0 46 120582.0 47 120582.0 48 126183.0 49 131784.0 50 134735.5 51 137687.0 52 139169.5 53 140652.0 54 140652.0 55 137102.5 56 133553.0 57 128877.0 58 124201.0 59 121373.0 60 118545.0 61 118545.0 62 109907.5 63 101270.0 64 92843.0 65 84416.0 66 75349.5 67 66283.0 68 66283.0 69 58054.0 70 49825.0 71 43788.0 72 37751.0 73 30106.0 74 22461.0 75 22461.0 76 18343.0 77 14225.0 78 12305.5 79 10386.0 80 9027.5 81 7669.0 82 7669.0 83 6327.0 84 4985.0 85 4432.5 86 3880.0 87 3320.5 88 2761.0 89 2761.0 90 1933.0 91 1105.0 92 649.5 93 194.0 94 123.5 95 53.0 96 53.0 97 35.5 98 18.0 99 14.0 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1840639.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.346650244658555 #Duplication Level Percentage of deduplicated Percentage of total 1 86.61993435564813 47.07503276641693 2 7.493177623532323 8.144582070544258 3 2.146876193004119 3.5002658873933687 4 1.011885823882273 2.1997041983223222 5 0.5685128693610597 1.5448385035376386 6 0.3666535975915413 1.1955836897551968 7 0.2671210707659865 1.0161994784128427 8 0.18850801666082667 0.8195823399824171 9 0.14130593101874106 0.6911553609514233 >10 0.9506624110573523 10.136523617307668 >50 0.12471297354025264 4.755202235923662 >100 0.10581899076470079 12.029590341179262 >500 0.011523422059786969 4.182432481790191 >1k 0.0033067211128084348 2.7093070284829013 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4709 0.25583506597437083 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3642 0.19786606716471833 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3344 0.18167603750653985 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.432895858449158E-5 2 0.0 1.0865791716898316E-4 0.0 0.0 5.432895858449158E-5 3 0.0 1.6298687575347476E-4 0.0 0.0 5.432895858449158E-5 4 0.0 1.6298687575347476E-4 0.0 0.0 5.432895858449158E-5 5 0.0 2.1731583433796633E-4 0.0 0.0 5.432895858449158E-5 6 0.0 2.1731583433796633E-4 0.0 0.0 5.432895858449158E-5 7 0.0 2.1731583433796633E-4 0.0 0.0 5.432895858449158E-5 8 0.0 2.1731583433796633E-4 0.0 0.0 5.432895858449158E-5 9 0.0 2.1731583433796633E-4 0.0 0.0 5.432895858449158E-5 10 0.0 2.1731583433796633E-4 0.0 1.0865791716898316E-4 5.432895858449158E-5 11 0.0 2.1731583433796633E-4 0.0 3.8030271009144106E-4 5.432895858449158E-5 12 0.0 2.1731583433796633E-4 0.0 5.432895858449158E-4 5.432895858449158E-5 13 0.0 2.1731583433796633E-4 0.0 5.976185444294074E-4 5.432895858449158E-5 14 0.0 2.1731583433796633E-4 0.0 8.692633373518653E-4 5.432895858449158E-5 15 0.0 2.1731583433796633E-4 0.0 0.0011409081302743232 5.432895858449158E-5 16 0.0 2.1731583433796633E-4 0.0 0.0018471845918727138 5.432895858449158E-5 17 0.0 2.1731583433796633E-4 0.0 0.0022818162605486463 5.432895858449158E-5 18 0.0 2.1731583433796633E-4 0.0 0.0024448031363021212 1.0865791716898316E-4 19 0.0 2.1731583433796633E-4 0.0 0.0026621189706400876 1.0865791716898316E-4 20 0.0 2.1731583433796633E-4 0.0 0.0033140664736539863 1.0865791716898316E-4 21 0.0 2.1731583433796633E-4 0.0 0.00412900085242136 1.0865791716898316E-4 22 0.0 2.1731583433796633E-4 0.0 0.0058131985685405995 1.6298687575347476E-4 23 0.0 2.1731583433796633E-4 0.0 0.00825800170484272 1.6298687575347476E-4 24 0.0 2.716447929224579E-4 0.0 0.011843712971419165 1.6298687575347476E-4 25 0.0 2.716447929224579E-4 0.0 0.014288516107721286 1.6298687575347476E-4 26 0.0 2.716447929224579E-4 0.0 0.02026470155201536 1.6298687575347476E-4 27 0.0 2.716447929224579E-4 0.0 0.05655644588645574 1.6298687575347476E-4 28 0.0 2.716447929224579E-4 0.0 0.20416822636051937 1.6298687575347476E-4 29 0.0 3.259737515069495E-4 0.0 0.396873042459711 1.6298687575347476E-4 30 0.0 3.259737515069495E-4 0.0 0.6472752125756327 1.6298687575347476E-4 31 0.0 3.259737515069495E-4 0.0 1.291508003470534 1.6298687575347476E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATAT 85 5.1850293E-8 21.764706 1 GGTATCA 1990 0.0 20.638191 1 ATAACGT 65 6.905012E-5 19.923077 17 AGTCGGT 440 0.0 18.920454 11 GCAGTCG 460 0.0 18.097824 9 CTTATAC 2715 0.0 17.64825 37 CGCCTTA 325 0.0 17.646154 25 ATACACA 600 0.0 17.575 37 TCGGTGA 510 0.0 17.411764 13 TAACGTT 75 2.068118E-4 17.266666 18 TATACTG 130 1.3946192E-8 17.076923 5 GTGATTC 500 0.0 17.02 16 CTCTATG 755 0.0 16.907286 1 CGGTGAT 515 0.0 16.883493 14 CAGTCGG 520 0.0 16.721153 10 GTATTAT 180 1.0913936E-11 16.444445 1 GTTCTAA 80 3.3839484E-4 16.1875 1 GTACTAT 220 0.0 15.977273 1 ATTAGAC 70 0.0025932887 15.857142 3 GGCAGTC 535 0.0 15.560747 8 >>END_MODULE