ERR1631250.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631250.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	315591
Sequences flagged as poor quality	0
Sequence length	43
%GC	52

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	503	0.15938350586677058	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	464	0.1470257390103013	No Hit
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	437	0.13847036195582257	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	435	0.13783663032215748	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	363	0.11502229151021416	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	362	0.11470542569338163	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	350	0.11090303589139107	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	349	0.11058617007455854	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	340	0.1077343777230656	No Hit
GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG	323	0.10234765883691234	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	230	0.0	25.73913	1
GCAATAC	60	1.3322751E-6	24.666668	37
CGGACAG	50	2.6960866E-4	22.2	34
ATTCGCA	45	0.0038197513	20.555557	14
CGGTGAT	45	0.0038197513	20.555557	14
TGTAGAG	45	0.0038197513	20.555557	5
ATAACGA	90	9.4236384E-8	20.555557	12
ACGGACA	55	5.131737E-4	20.181818	33
GGCAACT	65	6.8818685E-5	19.923077	27
TCGTTTA	60	9.216586E-4	18.5	30
CGAACGA	80	1.6106218E-5	18.5	16
TGCCCCG	50	0.0070238523	18.5	5
TAAAGCC	60	9.216586E-4	18.5	4
AAGACGG	100	2.8585418E-7	18.5	5
ATCCGGG	70	1.2156437E-4	18.5	15
CGCAGTT	50	0.0070238523	18.5	17
AACGAAC	80	1.6106218E-5	18.5	14
AGTTCAC	60	9.216586E-4	18.5	20
CAGTACC	50	0.0070238523	18.5	4
GACGAAA	50	0.0070238523	18.5	22