##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631243.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1030680 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.8267192533085 34.0 33.0 34.0 31.0 34.0 2 32.98254162300617 34.0 33.0 34.0 31.0 34.0 3 33.078992509799356 34.0 33.0 34.0 31.0 34.0 4 36.41581480187837 37.0 37.0 37.0 35.0 37.0 5 36.40946462529592 37.0 37.0 37.0 35.0 37.0 6 36.46534908992122 37.0 37.0 37.0 35.0 37.0 7 36.457937478169754 37.0 37.0 37.0 35.0 37.0 8 36.45905324640044 37.0 37.0 37.0 35.0 37.0 9 38.2993945744557 39.0 39.0 39.0 37.0 39.0 10 38.26871676951139 39.0 39.0 39.0 37.0 39.0 11 38.32243179260294 39.0 39.0 39.0 37.0 39.0 12 38.12434994372647 39.0 39.0 39.0 37.0 39.0 13 38.23811464276012 39.0 39.0 39.0 37.0 39.0 14 39.73960783172274 41.0 40.0 41.0 38.0 41.0 15 39.7257199130671 41.0 40.0 41.0 38.0 41.0 16 39.701205029689135 41.0 40.0 41.0 37.0 41.0 17 39.72217856172624 41.0 40.0 41.0 38.0 41.0 18 39.70614739783444 41.0 40.0 41.0 38.0 41.0 19 39.7251959871153 41.0 40.0 41.0 37.0 41.0 20 39.696092870726126 41.0 40.0 41.0 37.0 41.0 21 39.666535685178715 41.0 40.0 41.0 37.0 41.0 22 39.59028505452711 41.0 40.0 41.0 37.0 41.0 23 39.50945492296348 41.0 40.0 41.0 36.0 41.0 24 39.47373481584973 41.0 39.0 41.0 36.0 41.0 25 39.46009721737106 41.0 39.0 41.0 36.0 41.0 26 39.35469689913455 41.0 39.0 41.0 36.0 41.0 27 39.27343404354407 41.0 39.0 41.0 35.0 41.0 28 39.15164939651492 41.0 39.0 41.0 35.0 41.0 29 39.03902860247604 41.0 39.0 41.0 35.0 41.0 30 38.94151725074708 40.0 38.0 41.0 35.0 41.0 31 38.844801490278265 40.0 38.0 41.0 35.0 41.0 32 38.724667209997286 40.0 38.0 41.0 35.0 41.0 33 38.5791079675554 40.0 38.0 41.0 35.0 41.0 34 38.496762331664534 40.0 38.0 41.0 35.0 41.0 35 38.34775196957349 40.0 38.0 41.0 35.0 41.0 36 38.250103814957114 40.0 38.0 41.0 35.0 41.0 37 38.13496526564986 40.0 37.0 41.0 35.0 41.0 38 37.99001144875228 40.0 37.0 41.0 34.0 41.0 39 37.84563103970194 40.0 37.0 41.0 34.0 41.0 40 37.67354465013389 40.0 36.0 41.0 33.0 41.0 41 37.50169208677766 40.0 36.0 41.0 33.0 41.0 42 37.3012438390189 40.0 36.0 41.0 33.0 41.0 43 36.365277292661155 39.0 35.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 4.0 11 5.0 12 8.0 13 4.0 14 4.0 15 6.0 16 4.0 17 17.0 18 21.0 19 46.0 20 80.0 21 172.0 22 284.0 23 477.0 24 809.0 25 1262.0 26 1982.0 27 2933.0 28 4292.0 29 6136.0 30 8476.0 31 10646.0 32 12887.0 33 16875.0 34 24890.0 35 36485.0 36 54760.0 37 115196.0 38 203743.0 39 528173.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.67576745449606 16.893022082508637 12.265688671556642 25.16552179143866 2 19.66740404393216 20.740579035200064 32.754298133271234 26.837718787596536 3 20.226452439166376 23.009081383164514 29.26116738463927 27.503298793029845 4 13.939341017580626 15.443784685838475 33.04633833973688 37.570535956844026 5 15.081693639150851 36.71265572243567 31.509779951100242 16.69587068731323 6 33.63915085186479 33.708619552140334 16.755443008499242 15.896786587495635 7 29.834963325183374 30.57573640703225 20.11245003298793 19.476850234796444 8 30.77531338533783 30.107113750145537 19.054895796949587 20.06267706756704 9 28.72918849691466 13.241258198470913 18.825823728024215 39.20372957659021 10 19.585807428105717 25.741840338417354 28.58181006714014 26.09054216633679 11 36.437982691038926 22.299355765125934 19.517600031047465 21.745061512787675 12 24.173167229401948 26.154286490472312 26.16156323980285 23.510983040322895 13 30.964411844607444 18.062735281561686 25.21772033996973 25.75513253386114 14 23.548045950246436 20.297570535956844 24.756568479062366 31.39781503473435 15 26.923875499670118 26.207261225598632 21.94075755811697 24.928105716614272 16 25.204234097877134 24.980498311794154 23.503027127721506 26.31224046260721 17 23.95748437924477 26.382485349478014 24.65188031202701 25.008149959250204 18 24.244382349516826 22.884794504598904 27.069216439632086 25.801606706252183 19 24.7354173943416 24.824193736174177 26.622132960763768 23.818255908720456 20 25.099739977490586 23.498370008149962 26.66230061706834 24.73958939729111 21 28.084274459580083 23.584720766872355 25.482982108898977 22.848022664648582 22 26.93115224900066 23.726180773858037 25.075678193037604 24.2669887841037 23 24.8164318702216 24.17142080956262 25.560018628478286 25.452128691737492 24 24.18180230527419 25.062871114215856 26.129060426126436 24.626266154383515 25 24.25515193852602 23.92992975511313 26.14215857492141 25.672759731439438 26 24.846994217409865 25.111285753095043 26.30603096984515 23.73568905964994 27 25.72243567353592 23.965537315170568 25.335118562502423 24.97690844879109 28 23.692319633639926 24.312686769899482 27.283735009896382 24.71125858656421 29 23.6001474754531 24.23244848061474 27.70219660806458 24.465207435867583 30 22.777292661155744 25.16348430162611 27.902161679667792 24.157061357550354 31 23.826599914619475 25.203069817984243 26.289634028020338 24.680696239375948 32 23.121240346179224 24.636356580121863 27.103756743121043 25.138646330577867 33 23.132786121783678 24.361392478751892 27.530950440485892 24.97487095897854 34 24.253114448713468 24.455214033453643 26.880312027011293 24.411359490821592 35 23.987658633135407 24.265436410913182 27.664357511545774 24.082547444405638 36 22.50164939651492 24.992626227345056 26.789886288663794 25.71583808747623 37 22.67066402763224 23.688244654014827 28.03091163115613 25.610179687196805 38 22.505918422788838 22.583634105638993 29.29551364147941 25.614933830092756 39 22.422963480420695 22.692591298948265 29.303663600729617 25.580781619901426 40 22.04884154150658 22.542981332712383 30.19909186168355 25.209085264097492 41 20.229266115574184 23.022470601932703 31.310979159389916 25.437284123103193 42 20.967807660961697 23.101544611324563 30.807816199014244 25.122831528699503 43 19.667015950634532 22.154305895137192 31.419160166103932 26.759517988124344 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 311.0 1 289.0 2 267.0 3 970.5 4 1674.0 5 1674.0 6 2297.0 7 2920.0 8 2733.5 9 2547.0 10 3818.0 11 5089.0 12 5089.0 13 8332.5 14 11576.0 15 16439.0 16 21302.0 17 18316.5 18 15331.0 19 15331.0 20 16101.5 21 16872.0 22 12403.0 23 7934.0 24 7984.0 25 8034.0 26 8034.0 27 8691.5 28 9349.0 29 10854.5 30 12360.0 31 14305.5 32 16251.0 33 16251.0 34 19925.5 35 23600.0 36 28157.0 37 32714.0 38 37398.5 39 42083.0 40 42083.0 41 45815.5 42 49548.0 43 53072.5 44 56597.0 45 60591.0 46 64585.0 47 64585.0 48 69510.5 49 74436.0 50 74332.0 51 74228.0 52 75267.5 53 76307.0 54 76307.0 55 73020.5 56 69734.0 57 66584.5 58 63435.0 59 59974.0 60 56513.0 61 56513.0 62 53909.0 63 51305.0 64 47200.5 65 43096.0 66 38007.0 67 32918.0 68 32918.0 69 28410.0 70 23902.0 71 21498.5 72 19095.0 73 17473.5 74 15852.0 75 15852.0 76 14507.0 77 13162.0 78 10485.5 79 7809.0 80 5446.5 81 3084.0 82 3084.0 83 2409.5 84 1735.0 85 1566.5 86 1398.0 87 1256.5 88 1115.0 89 1115.0 90 799.0 91 483.0 92 281.5 93 80.0 94 56.5 95 33.0 96 33.0 97 23.5 98 14.0 99 8.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1030680.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.345833715948785 #Duplication Level Percentage of deduplicated Percentage of total 1 87.12781357562102 40.38011160009917 2 6.358388204622035 5.893696048657258 3 1.9404641749166434 2.6979728994732755 4 0.9933072757722912 1.8414261532713878 5 0.6209605587369754 1.4389467399693259 6 0.3925218082228828 1.091505027226876 7 0.3058420128594695 0.992215214993523 8 0.2478896142449766 0.9190920673366699 9 0.1918901913677789 0.8003979810767404 >10 1.4393364200184202 13.330953462231673 >50 0.18942787514254877 6.181565613817083 >100 0.1751289434407086 16.053027756866108 >500 0.013665523792898308 4.165331638537107 >1k 0.0027331047585796623 1.8034602750399613 >5k 4.2047765516610186E-4 1.3999739171091992 >10k+ 2.1023882758305093E-4 1.0103236042946329 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10369 1.006034850778127 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7269 0.7052625451158459 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7099 0.688768579966624 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3836 0.3721814724259712 No Hit CTCCAGGACAGGCTGCATCAGAAGAGGCCATCAAGCAGATCAC 1862 0.1806574300461831 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 1449 0.14058679706601468 No Hit GTGCAGGAGGCGGCGGGTGGGGGGCTGCCTGCGGGCTGCGTCT 1373 0.13321302441106844 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 1216 0.11798036247914 No Hit TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC 1168 0.11332324290759498 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1161 0.11264407963674467 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 1143 0.11089765979741531 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 1129 0.10953933325571469 No Hit GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC 1080 0.1047851903597625 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 1050 0.10187449062754686 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1039 0.10080723405906782 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.702332440718748E-5 0.0 2 0.0 0.0 0.0 9.702332440718748E-5 0.0 3 0.0 0.0 0.0 9.702332440718748E-5 0.0 4 0.0 9.702332440718748E-5 0.0 9.702332440718748E-5 0.0 5 1.9404664881437497E-4 9.702332440718748E-5 0.0 1.9404664881437497E-4 0.0 6 1.9404664881437497E-4 9.702332440718748E-5 0.0 1.9404664881437497E-4 0.0 7 1.9404664881437497E-4 9.702332440718748E-5 0.0 1.9404664881437497E-4 0.0 8 1.9404664881437497E-4 9.702332440718748E-5 0.0 1.9404664881437497E-4 0.0 9 1.9404664881437497E-4 9.702332440718748E-5 0.0 5.821399464431249E-4 0.0 10 2.9106997322156245E-4 9.702332440718748E-5 0.0 9.702332440718748E-4 0.0 11 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.0018434431637365622 0.0 12 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.002813676407808437 0.0 13 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.003201769705437187 0.0 14 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.0038809329762874993 0.0 15 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.004948189544766562 0.0 16 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.0060154461132456245 0.0 17 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.007567819303760624 0.0 18 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.008538052547832499 0.0 19 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.0100904257383475 0.0 20 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.012613032172934373 0.0 21 2.9106997322156245E-4 9.702332440718748E-5 0.0 0.01581480187837156 0.0 22 3.8809329762874993E-4 9.702332440718748E-5 0.0 0.023091551208910623 0.0 23 3.8809329762874993E-4 9.702332440718748E-5 0.0 0.032599837000814993 0.0 24 3.8809329762874993E-4 9.702332440718748E-5 0.0 0.042690262739162495 0.0 25 4.851166220359374E-4 9.702332440718748E-5 0.0 0.05025808204292312 0.0 26 5.821399464431249E-4 9.702332440718748E-5 0.0 0.06316218418907905 0.0 27 5.821399464431249E-4 9.702332440718748E-5 0.0 0.12244343540187061 0.0 28 5.821399464431249E-4 9.702332440718748E-5 0.0 0.3202739938681259 0.0 29 6.791632708503124E-4 1.9404664881437497E-4 0.0 0.6520937633407071 0.0 30 6.791632708503124E-4 1.9404664881437497E-4 0.0 1.192707726937556 0.0 31 6.791632708503124E-4 1.9404664881437497E-4 0.0 2.0144952846664337 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGTCC 40 0.0019310525 23.125 8 GGACCGT 40 0.0019310525 23.125 6 GCAGTCG 690 0.0 21.985508 9 CAGTCGG 715 0.0 21.216784 10 AGTCGGT 715 0.0 21.216784 11 GGCAGTC 730 0.0 20.78082 8 TCGGTGA 725 0.0 20.668964 13 CGGTGAT 755 0.0 20.33775 14 GTGATTC 750 0.0 20.226667 16 TACTGGA 65 6.901249E-5 19.923077 2 GGGCAGT 780 0.0 19.685898 7 GTCGGTG 775 0.0 19.574192 12 TCCTCGC 620 0.0 18.798388 21 TTCCTCG 630 0.0 18.79365 20 AGCGTCA 140 9.458745E-11 18.5 3 ACGAGTG 50 0.007034403 18.499998 5 TTACAAC 50 0.007034403 18.499998 3 GATTCCT 810 0.0 18.04321 18 GGTGATT 855 0.0 17.742691 15 AGGCCCG 355 0.0 17.718311 10 >>END_MODULE