FastQCFastQC Report
Fri 10 Feb 2017
ERR1631237.fastq

Summary

[OK]Basic Statistics

MeasureValue
FilenameERR1631237.fastq
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6422
Sequences flagged as poor quality0
Sequence length43
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA160.24914356898162568No Hit
AGATTGAGCAATAACAGGTCTGTGATGCCCTTAGATGTCCGGG90.14014325755216445No Hit
CCATGGTAGGCACGGCGACTACCATCGAAAGTTGATAGGGCAG80.12457178449081284No Hit
GTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTG80.12457178449081284No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT80.12457178449081284No Hit
CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGAGATTGAGC70.10900031142946122No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT70.10900031142946122No Hit
TTCTAGAGCTAATACATGCCGACGGGCGCTGACCCCCTTCGCG70.10900031142946122No Hit
GGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGCCCCGG70.10900031142946122No Hit
GTTATTGCTCAATCTCGGGTGGCTGAACGCCACTTGTCCCTCT70.10900031142946122No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCTTAT250.005102717329.637
TGTCTCT850.00813633813.05882437
Produced by FastQC (version 0.11.5)