##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631234.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 12269 Sequences flagged as poor quality 0 Sequence length 43 %GC 54 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.65865188686934 34.0 31.0 34.0 31.0 34.0 2 32.82704376884832 34.0 31.0 34.0 31.0 34.0 3 32.839351210367596 34.0 31.0 34.0 31.0 34.0 4 36.28576086070584 37.0 37.0 37.0 35.0 37.0 5 36.25878229684571 37.0 37.0 37.0 35.0 37.0 6 36.32520987855571 37.0 37.0 37.0 35.0 37.0 7 36.34550493112723 37.0 37.0 37.0 35.0 37.0 8 36.31632569891597 37.0 37.0 37.0 35.0 37.0 9 38.13782704376885 39.0 39.0 39.0 37.0 39.0 10 38.10131225038715 39.0 38.0 39.0 37.0 39.0 11 38.16464259515853 39.0 39.0 39.0 37.0 39.0 12 37.9589208574456 39.0 38.0 39.0 35.0 39.0 13 38.0652049881816 39.0 38.0 39.0 37.0 39.0 14 39.50802836416986 41.0 39.0 41.0 37.0 41.0 15 39.479093650664275 41.0 39.0 41.0 37.0 41.0 16 39.397668921672505 40.0 39.0 41.0 37.0 41.0 17 39.31306544950689 40.0 39.0 41.0 36.0 41.0 18 39.37346156981009 41.0 39.0 41.0 37.0 41.0 19 39.40940581954519 41.0 39.0 41.0 37.0 41.0 20 39.439481620343955 41.0 39.0 41.0 37.0 41.0 21 39.43671040834624 41.0 39.0 41.0 37.0 41.0 22 39.385605998858914 41.0 39.0 41.0 36.0 41.0 23 39.32684000326025 41.0 39.0 41.0 36.0 41.0 24 39.27516505012633 41.0 39.0 41.0 36.0 41.0 25 39.2829081424729 41.0 39.0 41.0 36.0 41.0 26 39.151275572581305 41.0 39.0 41.0 36.0 41.0 27 39.09438422039286 41.0 39.0 41.0 35.0 41.0 28 38.99820686282501 40.0 39.0 41.0 35.0 41.0 29 38.88369060233108 40.0 39.0 41.0 35.0 41.0 30 38.75645936914174 40.0 38.0 41.0 35.0 41.0 31 38.65245741299209 40.0 38.0 41.0 35.0 41.0 32 38.50590920205396 40.0 38.0 41.0 35.0 41.0 33 38.359850028527184 40.0 38.0 41.0 34.0 41.0 34 38.32113456679436 40.0 38.0 41.0 34.0 41.0 35 38.22870649604695 40.0 37.0 41.0 34.0 41.0 36 38.11687994131551 40.0 37.0 41.0 34.0 41.0 37 38.0295867633874 40.0 37.0 41.0 33.0 41.0 38 37.87122014834135 40.0 37.0 41.0 33.0 41.0 39 37.683837313554484 40.0 36.0 41.0 33.0 41.0 40 37.620751487488796 40.0 36.0 41.0 33.0 41.0 41 37.43018990952808 40.0 35.0 41.0 33.0 41.0 42 37.26073844649115 39.0 35.0 41.0 33.0 41.0 43 36.32928519031706 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 20 2.0 21 3.0 22 2.0 23 6.0 24 9.0 25 30.0 26 34.0 27 48.0 28 51.0 29 61.0 30 119.0 31 147.0 32 149.0 33 221.0 34 333.0 35 446.0 36 762.0 37 1494.0 38 2909.0 39 5443.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.08166924769745 15.282419105061537 14.467356752791588 28.16855489444943 2 20.604776265384302 18.021028608688564 33.55611704295379 27.818078082973347 3 20.47436628902111 20.31950444208982 28.877659140924283 30.328470127964792 4 14.93194229358546 17.246719374032114 30.255114516260495 37.56622381612193 5 16.80658570380634 35.308501100334176 30.04319830467031 17.841714891189177 6 32.25201727932187 29.969842692966015 18.83609096095851 18.942049066753608 7 32.78995843182003 29.61121525796723 16.912543809601434 20.6862825006113 8 34.615698100904716 27.826228706496046 16.456108892330263 21.10196430026897 9 30.401825739669086 12.943190154046786 15.787757763468905 40.86722634281523 10 21.76216480560763 23.66941070991931 23.34338576901133 31.225038715461732 11 36.57999836987529 23.424892004238323 15.274268481538838 24.720841144347542 12 25.731518461162278 25.747819708207675 23.94653190969109 24.574129920938955 13 36.18061781726302 16.749531339147445 22.422365310946287 24.64748553264325 14 25.3973428967316 19.17026652538919 21.45244111174505 33.97994946613416 15 34.62384872442742 21.615453582199038 17.12446002119162 26.636237672181924 16 28.95101475262858 22.88695085174016 22.756540875376967 25.405493520254304 17 23.799820686282498 26.53843018990953 22.732089004808866 26.929660118999106 18 27.83437933001875 19.83861765425055 22.911402722308257 29.415600293422443 19 26.33466460184204 27.736571847746355 23.17222267503464 22.756540875376967 20 28.942864129105878 20.33580568913522 24.859401744233434 25.86192843752547 21 32.13790855000408 19.015404678457905 22.642432146059175 26.20425462547885 22 31.95044420898199 19.455538348683675 19.422935854592875 29.171081587741458 23 26.962262613089898 21.990382264243213 21.159018664927867 29.88833645773902 24 26.595484554568426 21.501344852881246 23.94653190969109 27.956638682859236 25 26.269459613660445 21.639905452767135 21.949629146629718 30.1410057869427 26 29.798679598989324 20.295052571521722 21.58285108810824 28.323416741380715 27 27.263835683429782 19.643002689705764 21.207922406064064 31.885239220800393 28 26.815551389681307 20.16464259515853 23.865025674464096 29.154780340696064 29 25.72336783763958 20.76778873583829 25.356589779118107 28.152253647404024 30 25.10392044991442 22.585377781400275 26.67699078979542 25.633710978889884 31 26.130899013774556 23.19667454560274 23.34338576901133 27.329040671611377 32 24.64748553264325 22.340859075719294 27.263835683429782 25.747819708207675 33 26.465074578205233 20.80854185345179 26.50582769581873 26.220555872524248 34 27.31273942456598 22.340859075719294 22.658733393104573 27.687668106610158 35 25.69891596707148 23.253728910261636 23.913929415600293 27.13342570706659 36 23.107017686853045 22.104490993561008 26.073844649115657 28.71464667047029 37 23.897628168554892 21.74586355856223 26.08199527263836 28.274513000244518 38 24.525226179802758 18.844241584481214 28.356019235471514 28.274513000244518 39 24.818648626619936 18.159589208574456 29.52155839921754 27.500203765588065 40 23.522699486510717 18.289999184937646 28.470127964789306 29.717173363762328 41 20.286901947999024 20.00163012470454 31.314695574211427 28.39677235308501 42 20.33580568913522 19.18656777243459 30.32031950444209 30.1573070339881 43 18.371505420164645 21.199771782541365 33.27084521965931 27.157877577634686 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1.0 1 1.0 2 1.0 3 3.0 4 5.0 5 5.0 6 9.0 7 13.0 8 13.0 9 13.0 10 13.0 11 13.0 12 13.0 13 36.5 14 60.0 15 83.0 16 106.0 17 90.0 18 74.0 19 74.0 20 93.5 21 113.0 22 80.5 23 48.0 24 47.5 25 47.0 26 47.0 27 41.0 28 35.0 29 50.5 30 66.0 31 72.0 32 78.0 33 78.0 34 86.0 35 94.0 36 116.5 37 139.0 38 169.0 39 199.0 40 199.0 41 240.5 42 282.0 43 363.0 44 444.0 45 625.5 46 807.0 47 807.0 48 1106.5 49 1406.0 50 1386.0 51 1366.0 52 1191.0 53 1016.0 54 1016.0 55 902.5 56 789.0 57 811.0 58 833.0 59 796.5 60 760.0 61 760.0 62 760.5 63 761.0 64 741.0 65 721.0 66 670.0 67 619.0 68 619.0 69 553.0 70 487.0 71 436.0 72 385.0 73 304.5 74 224.0 75 224.0 76 175.0 77 126.0 78 99.5 79 73.0 80 56.0 81 39.0 82 39.0 83 27.5 84 16.0 85 10.0 86 4.0 87 3.0 88 2.0 89 2.0 90 2.5 91 3.0 92 1.5 93 0.0 94 0.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 12269.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 83.25861928437526 #Duplication Level Percentage of deduplicated Percentage of total 1 94.00881057268722 78.27043768848317 2 3.445912873225648 5.738038959980439 3 1.0181106216348508 2.54299453908224 4 0.3622124326970142 1.206292281359524 5 0.27410670582476754 1.1410872931779281 6 0.14684287812041116 0.7335561170429538 7 0.14684287812041116 0.8558154698834461 8 0.1076847772883015 0.7172548699975548 9 0.02936857562408223 0.22006683511288616 >10 0.430739109153206 7.123644958839351 >50 0.02936857562408223 1.4508109870405086 >100 0.0 0.0 >500 0.0 0.0 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCA 62 0.5053386584073681 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 59 0.4808867878392697 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 57 0.4645855407938707 No Hit TATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCT 46 0.37492868204417634 No Hit TCAATAAGGCGAGGAATCACCGACTGCCCATAGAGCTGTCTCT 44 0.3586274349987774 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCC 41 0.3341755644306789 No Hit GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGC 38 0.3097236938625805 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCA 38 0.3097236938625805 No Hit CTATGGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATA 38 0.3097236938625805 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATACTGTCT 38 0.3097236938625805 No Hit CTCTATGGGCAGTCGGTGATTCCTCGCCTTATTGACTGTCTCT 34 0.27712119977178257 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31 0.25266932920368407 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCA 25 0.20376558806748718 No Hit TCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT 24 0.1956149645447877 TruSeq Adapter, Index 5 (95% over 21bp) GTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAAT 22 0.1793137174993887 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATA 20 0.16301247045398973 No Hit CCACTGCTTCCCATGTACTCTGCGTTGATACCCTGTCTCTTAT 20 0.16301247045398973 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCT 20 0.16301247045398973 No Hit GGTATCAACGCAGAGTACATGGGCCTCTCTATGGGCATATCAA 20 0.16301247045398973 No Hit CTCTATGGGCAGTCGGTGATTCCTCCGCTTATTGATATGCCCC 19 0.15486184693129024 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19 0.15486184693129024 No Hit CTCTATGGGCATATCAATAAGCGGAGGAATCACCGACTGCCCA 19 0.15486184693129024 No Hit CTCTATGGGCATATCAATAAGGCGAGGAATCACCGACCTGTCT 18 0.14671122340859075 No Hit GTCGGTGATTCCTCGCCTTATTGATATGCCCATAGAGCTGTCT 18 0.14671122340859075 No Hit GGTATCAACGCAGAGTACATGGGAACAGTGGCTGTCTCTTATA 18 0.14671122340859075 No Hit CTATGGGCATATCAATAAGCGGAGGAATCACCGACTGCCCATA 15 0.1222593528404923 No Hit CCTTATTGATATGCCCATAGAGAGGCCCATGTACTCTGCGTTG 15 0.1222593528404923 No Hit TCTATGGGCAGTCGGTGATTCCTCGCCTTATTGATATGCCCAT 14 0.11410872931779281 No Hit ACGCAGAGTACATGGGCCTCTCTATGGGCATATCAATAAGGCG 14 0.11410872931779281 No Hit TATCAACGCAGAGTACATGGGCCTCTCTATGGGCTGTCTCTTA 14 0.11410872931779281 No Hit GGGCATATCAATAAGGCGAGGAATCACCGACTGCCCATAGAGA 13 0.10595810579509334 ABI Solid3 Adapter B (100% over 21bp) CATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTC 13 0.10595810579509334 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.008150623522699487 0.0 18 0.0 0.0 0.0 0.008150623522699487 0.0 19 0.0 0.0 0.0 0.008150623522699487 0.0 20 0.0 0.0 0.0 0.008150623522699487 0.0 21 0.0 0.0 0.0 0.008150623522699487 0.0 22 0.0 0.0 0.0 0.008150623522699487 0.0 23 0.0 0.0 0.0 0.03260249409079795 0.0 24 0.0 0.0 0.0 0.04075311761349743 0.0 25 0.0 0.0 0.0 0.04890374113619692 0.0 26 0.0 0.0 0.0 0.07335561170429537 0.0 27 0.0 0.0 0.0 0.11410872931779281 0.0 28 0.0 0.0 0.0 0.2608199527263836 0.0 29 0.0 0.0 0.0 0.5949955171570626 0.0 30 0.0 0.0 0.0 0.9862254462466379 0.0 31 0.0 0.0 0.0 1.9235471513570788 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GACTGTC 25 0.005289322 29.6 34 CTTATAC 35 8.376536E-4 26.428572 37 CTCTATG 100 3.9835868E-10 22.2 1 GGTATCA 70 4.4576536E-6 21.142859 1 TCTTATA 45 0.0036171165 20.555555 36 ATGGGAA 55 4.7553715E-4 20.181818 19 TCTATGG 110 1.3096724E-9 20.181818 2 CAGTCGG 65 6.217926E-5 19.923077 10 GCAGTCG 65 6.217926E-5 19.923077 9 AGTCGGT 65 6.217926E-5 19.923077 11 GGCAGTC 65 6.217926E-5 19.923077 8 TGGGCAG 75 8.102532E-6 19.733334 6 GGGCAGT 70 1.09915076E-4 18.5 7 CATGGGA 60 8.5459213E-4 18.5 18 ATTCCTC 80 1.4149009E-5 18.5 19 GTCGGTG 80 1.4149009E-5 18.5 12 ATGGGCA 125 6.4283086E-9 17.76 5 CTATGGG 125 6.4283086E-9 17.76 3 TATGGGC 125 6.4283086E-9 17.76 4 GGTGATT 85 2.3852557E-5 17.411764 15 >>END_MODULE