ERR1631230.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631230.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121113
Sequences flagged as poor quality	0
Sequence length	43
%GC	55

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC	220	0.18164854309611686	No Hit
GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA	207	0.17091476554952814	No Hit
TGCCTACCCTACGCCGGCAGGCGCGGGTAACCCGTTGAACCCC	171	0.14119045849743628	No Hit
GGGTTCAACGGGTTACCCGCGCCTGCCGGCGTAGGGTAGGCAC	167	0.13788775771387052	No Hit
GGTCTGTGATGCCCTTAGATGTCCGGGGCTGCACGCGCGCTAC	154	0.1271539801672818	No Hit
CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC	136	0.11229182664123587	No Hit
GTCCGGGGCTGCACGCGCGCTACACTGACTGGCTCAGCGTGTG	131	0.10816345066177867	No Hit
GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT	129	0.10651210026999579	No Hit
GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC	123	0.10155804909464715	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	90	1.382432E-10	24.666668	1
TGAACAG	55	1.8845014E-5	23.545454	5
CTTATAC	170	0.0	21.764706	37
CGGCGTC	70	1.20780795E-4	18.5	14
ATTAACC	60	9.1719354E-4	18.5	34
GTCGGCG	60	9.1719354E-4	18.5	12
GGCGTCC	75	2.0480914E-4	17.266666	15
CGGAATT	65	0.0015689266	17.076923	30
TCGGCGT	65	0.0015689266	17.076923	13
TCGGAAT	65	0.0015689266	17.076923	29
GTATCAA	130	1.3575118E-8	17.076923	2
ATCGGAA	65	0.0015689266	17.076923	28
TATCGGA	65	0.0015689266	17.076923	27
TCGTTAT	70	0.002574581	15.857142	23
TTCGTTA	70	0.002574581	15.857142	22
CGTTCGT	70	0.002574581	15.857142	20
AGCGGTC	70	0.002574581	15.857142	8
TTAACCA	70	0.002574581	15.857142	35
GAATTAA	70	0.002574581	15.857142	32
TCTTATA	280	0.0	15.196428	37