##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631220.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 417081 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.223345105626965 31.0 31.0 34.0 28.0 34.0 2 31.25784439952911 31.0 31.0 34.0 28.0 34.0 3 30.706901057588333 31.0 31.0 34.0 26.0 34.0 4 34.86850995370204 37.0 35.0 37.0 32.0 37.0 5 35.012124743155404 35.0 35.0 37.0 32.0 37.0 6 35.206139814568395 37.0 35.0 37.0 32.0 37.0 7 35.20314039718904 37.0 35.0 37.0 32.0 37.0 8 35.24868550713171 37.0 35.0 37.0 32.0 37.0 9 36.98826846583757 39.0 37.0 39.0 33.0 39.0 10 36.786288514700985 39.0 37.0 39.0 32.0 39.0 11 36.843704220523115 39.0 37.0 39.0 33.0 39.0 12 36.76228358520287 39.0 37.0 39.0 32.0 39.0 13 36.87542947293212 39.0 37.0 39.0 33.0 39.0 14 37.91590842066649 40.0 37.0 41.0 33.0 41.0 15 37.921506853584795 40.0 37.0 41.0 33.0 41.0 16 37.91111798427644 40.0 37.0 41.0 33.0 41.0 17 37.86768517386311 40.0 37.0 41.0 33.0 41.0 18 37.92610068547836 40.0 37.0 41.0 33.0 41.0 19 37.91163347167576 40.0 37.0 41.0 33.0 41.0 20 37.89260839021677 40.0 37.0 41.0 33.0 41.0 21 37.83493853711869 40.0 37.0 41.0 33.0 41.0 22 37.736178344254476 39.0 37.0 41.0 32.0 41.0 23 37.79190373092996 39.0 37.0 41.0 33.0 41.0 24 37.73656196278421 39.0 37.0 41.0 32.0 41.0 25 37.688698358352454 39.0 37.0 41.0 32.0 41.0 26 37.56227926949442 39.0 37.0 41.0 32.0 41.0 27 37.45416357973631 39.0 37.0 41.0 32.0 41.0 28 37.45024108026978 39.0 37.0 40.0 32.0 41.0 29 37.3796960302675 39.0 36.0 40.0 32.0 41.0 30 37.334407465216586 39.0 36.0 40.0 32.0 41.0 31 37.319201785744255 39.0 36.0 40.0 31.0 41.0 32 37.216991423728246 39.0 36.0 40.0 31.0 41.0 33 37.180921691470004 39.0 36.0 40.0 31.0 41.0 34 37.13037995017754 39.0 36.0 40.0 31.0 41.0 35 37.14762839832071 39.0 36.0 40.0 31.0 41.0 36 37.1411884022528 39.0 36.0 40.0 31.0 41.0 37 37.08340106597999 39.0 36.0 40.0 31.0 41.0 38 37.015608478928556 39.0 36.0 40.0 31.0 41.0 39 36.92799240435311 39.0 36.0 40.0 31.0 41.0 40 36.79306897221403 39.0 36.0 40.0 30.0 41.0 41 36.78530549221854 39.0 35.0 40.0 30.0 41.0 42 36.7535946255044 39.0 35.0 40.0 30.0 41.0 43 36.04616369482187 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 14.0 11 11.0 12 13.0 13 12.0 14 7.0 15 9.0 16 11.0 17 10.0 18 19.0 19 28.0 20 46.0 21 108.0 22 210.0 23 387.0 24 691.0 25 1168.0 26 1883.0 27 2887.0 28 4245.0 29 6120.0 30 8149.0 31 11056.0 32 14065.0 33 18203.0 34 23843.0 35 31665.0 36 43884.0 37 64239.0 38 105723.0 39 78368.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.41993281880498 24.491405746126052 16.539473147901727 24.54918828716724 2 13.280154214648954 21.687633816932443 40.81868989476864 24.213522073649962 3 14.4036769836075 28.92435761878388 34.892742656702175 21.77922274090644 4 11.408095789546875 19.577252380233094 36.1776249697301 32.83702686048993 5 12.410538960058117 38.36520963553842 35.080236213109686 14.144015191293777 6 27.69893617786473 39.37076970660375 17.76441506565871 15.165879049872807 7 23.160489209530045 34.773581150903546 22.22613832804659 19.839791311519825 8 25.034465727280793 34.711482901402846 22.856471524715822 17.397579846600543 9 22.52128483436071 15.07524917222314 19.220966670742616 43.182499322673536 10 13.828968473749704 28.139857725477786 33.8258036208794 24.205370179893116 11 30.36820186007035 22.506419616333517 24.92177778417142 22.20360073942472 12 19.098448502808807 27.197354950237486 28.944737353176002 24.759459193777708 13 29.256906931747075 20.10400857387414 26.070955042305933 24.56812945207286 14 21.721919723027423 23.177032758624826 25.555947166137994 29.545100352209765 15 23.7771559960775 29.54102440533134 21.91588684212419 24.765932756466967 16 25.49912367142114 27.46804577528106 22.87852959017553 24.15430096312227 17 19.60410567731448 32.493688276377966 24.429547258206437 23.47265878810111 18 22.923365005838196 25.397224999460537 24.785832967696923 26.893577027004344 19 22.936791654378887 28.355163625291013 24.774564173385986 23.933480546944118 20 23.395695320573225 26.327020410903394 25.661202500233767 24.616081768289614 21 24.015479007674767 25.907197882425713 27.441672001361844 22.63565110853767 22 20.676079706340015 33.27507126912998 24.927771823698514 21.121077200831493 23 22.515290794833618 24.74363492942618 26.703206331623836 26.03786794411637 24 22.264020657857824 29.055507203636704 27.502091919794957 21.17838021871051 25 22.504501523684848 29.746500080320132 25.203737403525935 22.54526099246909 26 24.53576163862655 26.32510231825473 26.786643361840984 22.352492681277738 27 22.4608649159276 31.593143777827326 25.568414768354348 20.37757653789072 28 20.678717083731936 24.75274586950736 30.369400667975764 24.199136378784935 29 20.47587878613507 27.97178485713806 27.120391482709593 24.43194487401728 30 22.333791277953203 26.293214027970585 28.382016922372394 22.990977771703818 31 22.655071796605455 24.887012354914273 29.500744459709267 22.957171388771005 32 22.174110064951414 30.638892685113923 27.13693503180437 20.05006221813029 33 22.198565746221956 25.696687214234164 29.582742920439912 22.522004119103965 34 20.737938194259627 29.68919706244111 28.37026860489929 21.202596138399976 35 21.105252936479964 26.79791215615192 32.2656750127673 19.83115989460081 36 25.26056089824279 25.45740515631256 24.84936978668412 24.432664158760527 37 21.39560421117241 26.579249594203525 28.557042876563543 23.46810331806052 38 21.654546718742882 24.593304418086653 28.574305710401575 25.177843152768887 39 25.178322675931053 25.615408038246766 26.54832035024372 22.65794893557846 40 20.436318125256246 24.299596481259037 33.561346596944 21.702738796540718 41 22.358966243967 26.294892359038176 26.219367460996786 25.12677393599804 42 21.89790472354291 24.562614935707934 31.86647198026283 21.67300836048633 43 22.70494220547088 24.305350759205048 30.11525339202697 22.874453643297105 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 4.0 1 6.5 2 9.0 3 29.5 4 50.0 5 50.0 6 74.5 7 99.0 8 101.5 9 104.0 10 168.0 11 232.0 12 232.0 13 373.5 14 515.0 15 1174.0 16 1833.0 17 2166.5 18 2500.0 19 2500.0 20 2790.5 21 3081.0 22 3867.5 23 4654.0 24 6057.5 25 7461.0 26 7461.0 27 9463.0 28 11465.0 29 13171.5 30 14878.0 31 16775.0 32 18672.0 33 18672.0 34 20659.5 35 22647.0 36 24004.0 37 25361.0 38 26525.5 39 27690.0 40 27690.0 41 28041.5 42 28393.0 43 28553.0 44 28713.0 45 28410.0 46 28107.0 47 28107.0 48 28187.5 49 28268.0 50 35662.5 51 43057.0 52 32980.0 53 22903.0 54 22903.0 55 29689.5 56 36476.0 57 30191.0 58 23906.0 59 17895.5 60 11885.0 61 11885.0 62 10179.5 63 8474.0 64 7192.5 65 5911.0 66 4843.5 67 3776.0 68 3776.0 69 3149.5 70 2523.0 71 2019.5 72 1516.0 73 1198.0 74 880.0 75 880.0 76 686.0 77 492.0 78 395.5 79 299.0 80 227.0 81 155.0 82 155.0 83 109.0 84 63.0 85 40.5 86 18.0 87 13.0 88 8.0 89 8.0 90 5.0 91 2.0 92 1.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 417081.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.22934977694301 #Duplication Level Percentage of deduplicated Percentage of total 1 87.11820149138248 60.31136442985117 2 8.647042912857065 11.972583167008361 3 2.0526553503257414 4.263119856576428 4 0.7681684896297627 2.1271922022481946 5 0.39615923854457435 1.3712923246284874 6 0.24309610737179096 1.0097631267993008 7 0.15711063318251872 0.7613666884788703 8 0.11016856552612461 0.6101518525785719 9 0.07603118745730088 0.4737230703394025 >10 0.4120179760647625 4.967828303715546 >50 0.010365025538165366 0.48411649728263195 >100 0.00483701191060122 0.6302603601137515 >500 0.0017275042537861498 1.0172665319027647 >1k 0.0010365025522716899 1.9295295351186466 >5k 0.0010365025522716899 5.567818088321787 >10k+ 3.4550085075723E-4 2.5026239650361224 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCTT 10463 2.5086254228794886 TruSeq Adapter, Index 11 (95% over 21bp) ATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATG 9733 2.333599468688336 No Hit CTTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGT 7986 1.9147359865349896 No Hit ACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCC 5559 1.332834629244679 No Hit CTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTCTTC 3742 0.8971878364154685 RNA PCR Primer, Index 11 (95% over 22bp) CATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGTC 2976 0.7135304653053004 No Hit CACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCG 1349 0.3234383728820061 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 974 0.23352777997559226 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 934 0.22393731673224143 No Hit TTATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTA 833 0.19972139704278066 No Hit TATACACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTAT 759 0.18197904004258167 No Hit ACATCTCCGAGCCCACGAGACCGTACTAGATCTCGTATGCCGT 753 0.18054047055607902 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 2.397615810837703E-4 0.0 11 0.0 0.0 0.0 2.397615810837703E-4 0.0 12 0.0 0.0 0.0 2.397615810837703E-4 0.0 13 0.0 0.0 0.0 2.397615810837703E-4 0.0 14 0.0 0.0 0.0 4.795231621675406E-4 0.0 15 0.0 0.0 0.0 4.795231621675406E-4 0.0 16 0.0 0.0 0.0 4.795231621675406E-4 0.0 17 0.0 0.0 0.0 4.795231621675406E-4 0.0 18 0.0 0.0 0.0 7.192847432513109E-4 0.0 19 0.0 0.0 0.0 7.192847432513109E-4 0.0 20 0.0 0.0 0.0 0.0011988079054188515 0.0 21 0.0 0.0 0.0 0.0014385694865026218 0.0 22 0.0 0.0 0.0 0.0014385694865026218 0.0 23 0.0 0.0 0.0 0.0014385694865026218 0.0 24 0.0 0.0 0.0 0.0014385694865026218 0.0 25 0.0 0.0 0.0 0.0014385694865026218 0.0 26 0.0 0.0 0.0 0.0014385694865026218 0.0 27 0.0 0.0 0.0 0.0021578542297539327 0.0 28 0.0 0.0 0.0 0.004555470040591636 0.0 29 0.0 0.0 0.0 0.009350701662267041 0.0 30 0.0 0.0 0.0 0.01630378751369638 0.0 31 0.0 0.0 0.0 0.03572447558148178 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 910 0.0 33.13736 1 CGTCTTC 560 0.0 31.05357 37 TCGCCGA 25 0.0054923785 29.6 1 ACGGTAC 25 0.0054923785 29.6 3 TTATACA 1055 0.0 28.933651 2 TATACAC 1155 0.0 26.909092 3 CCGTCTT 1770 0.0 25.607344 37 GCCGTCT 1820 0.0 25.005493 36 GTATCAA 330 0.0 22.424242 1 GTACTAT 50 2.698104E-4 22.2 1 TGCCGTC 2105 0.0 21.707838 35 ATGCCGT 2175 0.0 21.009195 34 TCACGGT 45 0.003821783 20.555555 1 TACTAGT 75 9.242574E-6 19.733334 7 TATGCCG 2310 0.0 19.541126 33 CCGTACA 105 2.2491804E-8 19.38095 17 ACTATCG 100 2.864017E-7 18.5 11 CACGGTA 50 0.007027552 18.5 2 GTACTGG 140 9.276846E-11 18.5 1 GGTATCA 165 3.6379788E-12 17.939394 1 >>END_MODULE