ERR1631212.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	ERR1631212.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	890445
Sequences flagged as poor quality	0
Sequence length	43
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGT	4263	0.47874938935026873	No Hit
ATACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATG	3756	0.42181156612704884	No Hit
TCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTT	3643	0.4091212820556014	RNA PCR Primer, Index 41 (95% over 22bp)
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2770	0.31108041484875537	No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	2617	0.2938979948228133	No Hit
ACACATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCC	2247	0.25234573724373766	No Hit
CATCTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTC	1364	0.15318183604826802	No Hit
CTCCGAGCCCACGAGACCCTAAGACATCTCGTATGCCGTCTTC	1225	0.13757166360639905	RNA PCR Primer, Index 41 (95% over 23bp)
GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA	933	0.10477907113858802	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	922	0.10354373375110197	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTATAC	660	0.0	26.628788	1
GTATCAA	1190	0.0	26.428572	1
CCGTCTT	670	0.0	24.574627	37
GCCGTCT	675	0.0	24.118519	36
TATACAC	870	0.0	22.752874	3
CGTCTTC	215	0.0	21.51163	37
TGCCGTC	785	0.0	20.738853	35
GATTACG	45	0.003825141	20.555555	1
TTATACA	915	0.0	20.21858	2
CGAACTA	85	1.2446635E-6	19.588236	29
GGTATCA	380	0.0	19.473684	1
ATGCCGT	840	0.0	19.160713	34
CGGTTCG	80	1.6160036E-5	18.5	22
TATATCG	60	9.2345866E-4	18.5	5
ATGACGG	50	0.007033667	18.5	20
TTACGGG	60	9.2345866E-4	18.5	3
TACGTTA	50	0.007033667	18.5	25
TGCGTTA	50	0.007033667	18.5	37
TATGCCG	895	0.0	17.569834	33
ATACCGC	75	2.0666071E-4	17.266666	6