##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631187.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1009349 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.469778045056763 31.0 31.0 34.0 28.0 34.0 2 31.463100473671645 31.0 31.0 34.0 28.0 34.0 3 30.93187688302064 31.0 31.0 34.0 27.0 34.0 4 35.09292425117576 37.0 35.0 37.0 32.0 37.0 5 35.29425699138752 37.0 35.0 37.0 33.0 37.0 6 35.479322811039594 37.0 35.0 37.0 33.0 37.0 7 35.48684746306778 37.0 35.0 37.0 33.0 37.0 8 35.504959137027924 37.0 35.0 37.0 33.0 37.0 9 37.2832677299923 39.0 37.0 39.0 34.0 39.0 10 37.11290643771381 39.0 37.0 39.0 33.0 39.0 11 37.17229818427521 39.0 37.0 39.0 33.0 39.0 12 37.10985001223561 39.0 37.0 39.0 33.0 39.0 13 37.16981341438888 39.0 37.0 39.0 33.0 39.0 14 38.29687452011148 40.0 38.0 41.0 34.0 41.0 15 38.30834924292787 40.0 38.0 41.0 34.0 41.0 16 38.30684034957185 40.0 38.0 41.0 33.0 41.0 17 38.290809224559595 40.0 38.0 41.0 33.0 41.0 18 38.31987152114878 40.0 38.0 41.0 33.0 41.0 19 38.35127790288592 40.0 38.0 41.0 34.0 41.0 20 38.36504420175777 40.0 38.0 41.0 34.0 41.0 21 38.30054322142292 40.0 38.0 41.0 34.0 41.0 22 38.2459476355552 40.0 38.0 41.0 34.0 41.0 23 38.23528630830367 40.0 38.0 41.0 34.0 41.0 24 38.18424548892405 40.0 38.0 41.0 33.0 41.0 25 38.16638546231284 40.0 38.0 41.0 33.0 41.0 26 38.061686294829634 40.0 37.0 41.0 33.0 41.0 27 37.98584434125362 40.0 37.0 41.0 33.0 41.0 28 37.979048872094786 40.0 37.0 41.0 33.0 41.0 29 37.9069628047385 40.0 37.0 41.0 33.0 41.0 30 37.833687852269136 40.0 37.0 41.0 33.0 41.0 31 37.83719902630309 40.0 37.0 41.0 33.0 41.0 32 37.70863992533801 40.0 37.0 41.0 33.0 41.0 33 37.703608959834504 40.0 37.0 41.0 33.0 41.0 34 37.62655038049277 40.0 37.0 41.0 32.0 41.0 35 37.579595362951764 40.0 37.0 41.0 32.0 41.0 36 37.583311619667725 40.0 37.0 41.0 32.0 41.0 37 37.49041312766942 40.0 37.0 41.0 32.0 41.0 38 37.46882396475352 40.0 37.0 41.0 32.0 41.0 39 37.40564561910697 39.0 37.0 41.0 32.0 41.0 40 37.33939895913108 39.0 36.0 41.0 31.0 41.0 41 37.29121839918601 39.0 36.0 41.0 31.0 41.0 42 37.2399180065567 39.0 36.0 41.0 31.0 41.0 43 36.58605199985337 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 6.0 10 12.0 11 11.0 12 8.0 13 8.0 14 5.0 15 9.0 16 8.0 17 14.0 18 14.0 19 46.0 20 70.0 21 169.0 22 360.0 23 685.0 24 1263.0 25 2121.0 26 3534.0 27 5508.0 28 8053.0 29 11765.0 30 16423.0 31 21888.0 32 28828.0 33 37607.0 34 49922.0 35 67216.0 36 93905.0 37 138698.0 38 243974.0 39 277217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.66759663902178 21.94959325268069 14.838772317602732 24.544037790694794 2 13.760354446281712 22.338854053454256 41.00652995148358 22.894261548780452 3 14.76357533420056 28.07254973255039 34.63430389290523 22.529571040343825 4 11.884095590326043 19.296794270366348 37.9385128434268 30.88059729588081 5 12.482104802204192 38.52562394176841 35.67150708030622 13.320764175721184 6 27.615027111534268 40.193431607897764 17.79622311014327 14.395318170424702 7 24.411576174346038 33.52348890225284 22.673426139026244 19.391508784374878 8 24.603382972589262 35.66318488451467 22.08482893429329 17.648603208602772 9 24.312799636201156 15.242398813492658 19.599860900441772 40.84494064986442 10 14.385509868241808 29.23963861855513 33.62335525175138 22.75149626145169 11 31.451163076398746 23.140459840946985 25.62176214569985 19.786614936954415 12 20.769228482913242 26.249988854202066 29.68745201114778 23.293330651736913 13 28.590408273055207 21.118364411120435 27.273222641524384 23.01800467429997 14 21.32097024914078 22.31824671149424 27.10965186471676 29.251131174648215 15 23.595604691736952 28.723464331960503 23.44095055327741 24.239980423025138 16 24.080372596594437 28.007458272609377 23.78503371975402 24.12713541104217 17 21.165523520605856 30.18549579976797 25.4743403916782 23.174640287947977 18 23.542005787889025 26.561476753828455 26.286249850150938 23.610267608131576 19 23.77998095802344 28.079286748191162 26.185590910577016 21.955141383208385 20 22.98154553083225 25.939491692169902 26.358870915808108 24.720091861189736 21 23.83784003352656 26.440804914851057 26.62894598399562 23.092409067626757 22 22.024592088564017 30.37928407319966 25.971393442704162 21.62473039553217 23 22.719891732195702 27.03940856928575 26.610716412261766 23.62998328625679 24 24.53234708708286 27.81842553963 26.006168332261687 21.643059041025452 25 22.291992165247105 27.767996996083617 26.141404013874293 23.79860682479499 26 24.703744690884914 27.456013727660107 26.494106597420714 21.34613498403426 27 22.190837856876065 28.695624605562596 26.105737460481954 23.007800077079384 28 21.331372993880212 26.926761704821622 28.383938558417356 23.357926742880807 29 23.63889992460487 28.104352409325216 26.02637937918401 22.230368286885906 30 21.43807543277895 27.56172542896461 27.21992095895473 23.78027817930171 31 24.529176726781323 25.620176965549078 27.69587129922356 22.154775008446038 32 23.65930911904604 26.605069207974648 26.93855148219298 22.79707019078634 33 22.63716514307737 27.612253046270418 28.104253335565794 21.646328475086417 34 23.289565848878834 27.778003445785355 26.389980076266976 22.542450629068835 35 21.63136833741352 26.22621115194051 29.145320399584286 22.997100111061684 36 24.42544650066528 26.366598669043118 25.706073914968957 23.501880915322648 37 22.66797708225797 27.02415121033458 27.570939288590964 22.736932418816487 38 22.380365958652558 25.484544988898783 28.37462562503158 23.76046342741708 39 23.616509254975238 26.04599598354979 26.910414534516804 23.427080226958168 40 21.519018694227665 25.418760012641812 30.814118803307878 22.24810248982265 41 22.460813851304156 26.268218425935924 26.69750502551645 24.57346269724347 42 23.049609203555953 25.425695175801433 28.963321903523955 22.561373717118656 43 22.883165287725056 25.08824995120617 29.038617960685553 22.98996680038322 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 16.0 1 23.5 2 31.0 3 92.0 4 153.0 5 153.0 6 200.5 7 248.0 8 271.5 9 295.0 10 485.0 11 675.0 12 675.0 13 1042.5 14 1410.0 15 3219.5 16 5029.0 17 5756.5 18 6484.0 19 6484.0 20 7027.5 21 7571.0 22 9419.5 23 11268.0 24 14533.0 25 17798.0 26 17798.0 27 22100.0 28 26402.0 29 31783.0 30 37164.0 31 40734.5 32 44305.0 33 44305.0 34 48508.0 35 52711.0 36 55920.0 37 59129.0 38 62540.0 39 65951.0 40 65951.0 41 68324.5 42 70698.0 43 68891.5 44 67085.0 45 68430.5 46 69776.0 47 69776.0 48 69589.5 49 69403.0 50 70387.5 51 71372.0 52 85253.5 53 99135.0 54 99135.0 55 78097.0 56 57059.0 57 59044.0 58 61029.0 59 50364.5 60 39700.0 61 39700.0 62 32001.5 63 24303.0 64 20304.0 65 16305.0 66 13755.5 67 11206.0 68 11206.0 69 8963.0 70 6720.0 71 5527.0 72 4334.0 73 3289.0 74 2244.0 75 2244.0 76 1729.0 77 1214.0 78 905.0 79 596.0 80 446.5 81 297.0 82 297.0 83 213.0 84 129.0 85 95.0 86 61.0 87 46.0 88 31.0 89 31.0 90 20.0 91 9.0 92 5.0 93 1.0 94 1.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1009349.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.35732061709899 #Duplication Level Percentage of deduplicated Percentage of total 1 79.05051770655326 41.3887330050967 2 12.652323983313918 13.248835666915554 3 3.6090524731370985 5.668809523799193 4 1.4662691327244592 3.0707969237204074 5 0.7622356661532358 1.9954308579286497 6 0.46940115681514083 1.4745952119244492 7 0.308662553872865 1.131252100692993 8 0.2182700941677152 0.9142429841170762 9 0.17193639744384198 0.8101916178044575 >10 1.0837015031653245 11.018785925104671 >50 0.12287568264998033 4.501438540721937 >100 0.0788758801736656 7.4350025851124215 >500 0.003792109567358791 1.37750310385474 >1k 0.001327238348575577 1.5270072602690699 >5k 3.7921095673587916E-4 1.529786886019137 >10k+ 3.7921095673587916E-4 2.9075878069185275 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGT 16790 1.663448420714738 No Hit ATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATG 12499 1.2383229190299887 No Hit TCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTT 8708 0.8627342970568158 TruSeq Adapter, Index 5 (95% over 21bp) ACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCC 6702 0.663992335653971 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2915 0.2888000087184908 No Hit CATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTC 2889 0.28622409097348883 No Hit CTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCGTCTTC 2874 0.28473798458214156 Illumina Paired End PCR Primer 2 (95% over 23bp) TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2719 0.2693815518715528 No Hit CACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTATGCCG 1515 0.15009674552607669 No Hit GTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGA 1326 0.13137180499510082 No Hit TTATACACATCTCCGAGCCCACGAGACACTGAGCGATCTCGTA 1144 0.11334038078008697 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 9.907375942315295E-5 0.0 3 0.0 0.0 0.0 9.907375942315295E-5 0.0 4 0.0 0.0 0.0 1.981475188463059E-4 0.0 5 0.0 0.0 0.0 1.981475188463059E-4 0.0 6 0.0 0.0 0.0 1.981475188463059E-4 0.0 7 0.0 0.0 0.0 2.972212782694588E-4 0.0 8 0.0 0.0 0.0 2.972212782694588E-4 0.0 9 0.0 0.0 0.0 2.972212782694588E-4 0.0 10 0.0 0.0 0.0 2.972212782694588E-4 0.0 11 0.0 0.0 0.0 2.972212782694588E-4 0.0 12 0.0 0.0 0.0 2.972212782694588E-4 0.0 13 0.0 0.0 0.0 2.972212782694588E-4 0.0 14 0.0 0.0 0.0 3.962950376926118E-4 0.0 15 0.0 0.0 0.0 3.962950376926118E-4 0.0 16 0.0 0.0 0.0 3.962950376926118E-4 0.0 17 0.0 0.0 0.0 4.953687971157647E-4 0.0 18 0.0 0.0 0.0 5.944425565389176E-4 0.0 19 0.0 0.0 0.0 6.935163159620706E-4 0.0 20 0.0 0.0 0.0 7.925900753852236E-4 0.0 21 0.0 0.0 0.0 8.916638348083765E-4 0.0 22 0.0 0.0 0.0 9.907375942315294E-4 0.0 23 0.0 0.0 0.0 0.0010898113536546824 0.0 24 0.0 0.0 0.0 0.001486106391347294 0.0 25 0.0 0.0 0.0 0.0016842539101936 0.0 26 0.0 0.0 0.0 0.0024768439855788237 0.0 27 0.0 0.0 0.0 0.0028731390232714354 0.0 28 0.0 0.0 0.0 0.0101055234611616 0.0 29 0.0 0.0 0.0 0.02625454624713553 0.0 30 9.907375942315295E-5 0.0 0.0 0.050428543546384846 0.0 31 9.907375942315295E-5 0.0 0.0 0.10680151265815888 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2130 0.0 32.30986 1 ACGGTAA 35 2.3880226E-5 31.714285 22 TTATACA 2280 0.0 30.18421 2 TATACAC 2335 0.0 30.027836 3 CGGTAAC 40 5.9394224E-5 27.750002 23 CGTCTTC 380 0.0 27.263159 37 GTATCAA 1845 0.0 26.371273 1 CCGTCTT 1340 0.0 26.369404 37 GATTACG 85 6.91216E-11 26.117647 1 GCCGTCT 1355 0.0 25.804426 36 GGTATCA 515 0.0 25.145632 1 TGCCGTC 1715 0.0 20.387754 35 GTCGAAC 55 5.1424967E-4 20.181818 17 TCGAACG 55 5.1424967E-4 20.181818 18 GAACGGT 65 6.901066E-5 19.923077 20 TTACGGG 105 2.2586391E-8 19.380953 3 ATGCCGT 1810 0.0 19.317678 34 ATTACGG 115 3.0486262E-9 19.304348 2 GCGGTAT 50 0.0070343036 18.499998 6 TAGCACG 50 0.0070343036 18.499998 5 >>END_MODULE