##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631178.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1098534 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.424932683012088 31.0 31.0 34.0 28.0 34.0 2 31.433557814323454 31.0 31.0 34.0 28.0 34.0 3 30.87697695292089 31.0 31.0 34.0 27.0 34.0 4 35.0234876662898 37.0 35.0 37.0 32.0 37.0 5 35.251390489506925 37.0 35.0 37.0 33.0 37.0 6 35.44728793100623 37.0 35.0 37.0 33.0 37.0 7 35.463588746456644 37.0 35.0 37.0 33.0 37.0 8 35.48046305348765 37.0 35.0 37.0 33.0 37.0 9 37.263917184174545 39.0 37.0 39.0 34.0 39.0 10 37.089100564934725 39.0 37.0 39.0 33.0 39.0 11 37.15038405729818 39.0 37.0 39.0 33.0 39.0 12 37.08095425357795 39.0 37.0 39.0 33.0 39.0 13 37.15850032861978 39.0 37.0 39.0 33.0 39.0 14 38.29125361618302 40.0 38.0 41.0 34.0 41.0 15 38.29544374593777 40.0 38.0 41.0 33.0 41.0 16 38.28239817793532 40.0 38.0 41.0 33.0 41.0 17 38.25757600584051 40.0 38.0 41.0 33.0 41.0 18 38.28399029979955 40.0 38.0 41.0 33.0 41.0 19 38.32179522891417 40.0 38.0 41.0 34.0 41.0 20 38.316984271765826 40.0 38.0 41.0 34.0 41.0 21 38.27300748087906 40.0 38.0 41.0 34.0 41.0 22 38.206892094373046 40.0 38.0 41.0 34.0 41.0 23 38.20460267957114 40.0 38.0 41.0 34.0 41.0 24 38.165262977750345 40.0 38.0 41.0 33.0 41.0 25 38.152445896076046 40.0 37.0 41.0 33.0 41.0 26 38.03699020694853 40.0 37.0 41.0 33.0 41.0 27 37.969585829842316 40.0 37.0 41.0 33.0 41.0 28 37.943128751590756 40.0 37.0 41.0 33.0 41.0 29 37.870754114119364 40.0 37.0 41.0 33.0 41.0 30 37.80764182082667 40.0 37.0 41.0 33.0 41.0 31 37.75996191287661 40.0 37.0 41.0 33.0 41.0 32 37.69056488010385 40.0 37.0 41.0 33.0 41.0 33 37.651125044832476 40.0 37.0 41.0 32.0 41.0 34 37.583358366695975 40.0 37.0 41.0 32.0 41.0 35 37.584401575190206 40.0 37.0 41.0 32.0 41.0 36 37.564827306209914 40.0 37.0 41.0 32.0 41.0 37 37.49032528806573 40.0 37.0 41.0 32.0 41.0 38 37.458287135400454 39.0 37.0 41.0 32.0 41.0 39 37.36931128212691 39.0 36.0 41.0 31.0 41.0 40 37.28519827333519 39.0 36.0 41.0 31.0 41.0 41 37.223025413869756 39.0 36.0 41.0 31.0 41.0 42 37.16634532932071 39.0 36.0 41.0 31.0 41.0 43 36.510577733597685 39.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 14.0 11 8.0 12 11.0 13 11.0 14 7.0 15 8.0 16 12.0 17 11.0 18 24.0 19 32.0 20 81.0 21 157.0 22 415.0 23 754.0 24 1464.0 25 2391.0 26 3851.0 27 6023.0 28 9143.0 29 13251.0 30 18100.0 31 24124.0 32 31885.0 33 41554.0 34 55058.0 35 74551.0 36 103274.0 37 152411.0 38 263983.0 39 295917.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.94784685772129 21.88516695887428 15.0144647320884 25.15252145131603 2 14.020503689462501 21.43165345815423 41.1158871732691 23.431955679114164 3 14.528635435953735 28.096171807153898 33.84028168449952 23.534911072392845 4 11.971864320995072 19.157531765061435 37.97014930807786 30.900454605865633 5 12.766559796965774 37.99554679236146 35.76366320933171 13.474230201341058 6 28.11073667269288 39.81679219760153 17.796445080443572 14.276026049262017 7 25.064586075624423 32.55147314511886 23.06828919268771 19.31565158656901 8 24.89654393946842 35.218846207764166 21.92522033910648 17.959389513660934 9 24.28864286403516 15.071267707690431 19.605128289156276 41.03496113911813 10 14.869180198337057 28.47722510181751 33.5187622777265 23.134832422118933 11 31.579177339982195 23.080487267576608 25.368263522112194 19.972071870329003 12 20.81783540609576 26.014306339175665 29.34501799671198 23.82284025801659 13 28.748495722481053 20.596267389083998 26.835400633935773 23.819836254499176 14 21.794500670894116 21.91666348060233 26.56549546941651 29.723340379087038 15 23.818834919993375 28.5396719628159 22.771530057330953 24.869963059859774 16 24.506569664662177 26.941086939503013 23.967942730948703 24.58440066488611 17 21.287188198089453 29.982777046500154 25.267401828254748 23.462632927155646 18 23.85388162769655 25.82468999594004 25.833428915263433 24.487999461099974 19 23.977682984777896 26.910682782690387 25.779903034407674 23.331731198124047 20 23.959021750806077 26.068469432898755 25.608128651457307 24.364380164837865 21 25.144055623221494 25.806028761968225 25.4908814838685 23.559034130941782 22 22.458567509062078 30.118230296012687 25.765702290507164 21.65749990441807 23 24.518039496274124 25.03791416560616 25.84171268253873 24.60233365558098 24 23.297230672878584 27.182954737859728 25.664203383782386 23.855611205479303 25 23.27520131375087 26.95465047053619 26.379611372975255 23.390536842737685 26 24.226196003036772 26.00747905845427 26.67209207907994 23.09423285942902 27 23.28485053717045 28.835156672437996 25.734842981646448 22.14514980874511 28 23.689298647106053 25.297532893838515 27.24649396377354 23.766674495281894 29 22.039099381539398 26.863255939279075 26.226771315225566 24.870873363955965 30 25.02243899597099 25.55569513551697 26.888107241104965 22.53375862740707 31 24.407346518177864 25.288702944105506 26.439236291275463 23.864714246441167 32 22.545046398199784 27.633009083014272 26.57833075717274 23.243613761613204 33 23.531360886417716 25.640171355643066 28.79483020097694 22.03363755696228 34 22.03363755696228 27.09957088264906 26.404280613981907 24.462510946406756 35 22.249743749396924 25.226256083107124 29.36094831839524 23.16305184910071 36 23.256995231827144 25.8195922930014 27.002259374766734 23.92115310040472 37 22.6481838522977 26.752562961182814 27.583306479362495 23.015946707156992 38 22.686052502699052 25.37481771160474 27.933591495575012 24.005538290121198 39 23.757571454320033 25.737846985163866 26.72407044297218 23.780511117543927 40 21.89936770277479 24.76227408528093 30.735598534046282 22.602759677898 41 22.8552780341801 25.85099778431983 26.31944027221734 24.974283909282736 42 23.097874075813767 25.18856949352501 28.94621377217273 22.767342658488495 43 23.302146314997987 24.499287231892687 29.115075182015303 23.083491271094022 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 10.0 1 19.5 2 29.0 3 86.0 4 143.0 5 143.0 6 185.0 7 227.0 8 246.5 9 266.0 10 408.5 11 551.0 12 551.0 13 864.5 14 1178.0 15 2771.5 16 4365.0 17 4947.0 18 5529.0 19 5529.0 20 5730.5 21 5932.0 22 7439.0 23 8946.0 24 12130.5 25 15315.0 26 15315.0 27 19280.0 28 23245.0 29 28448.5 30 33652.0 31 39449.5 32 45247.0 33 45247.0 34 51257.0 35 57267.0 36 62045.5 37 66824.0 38 70869.5 39 74915.0 40 74915.0 41 77777.5 42 80640.0 43 81206.5 44 81773.0 45 81427.5 46 81082.0 47 81082.0 48 79414.0 49 77746.0 50 74966.0 51 72186.0 52 71287.0 53 70388.0 54 70388.0 55 82162.0 56 93936.0 57 71538.0 58 49140.0 59 52662.0 60 56184.0 61 56184.0 62 47761.0 63 39338.0 64 28743.0 65 18148.0 66 14876.0 67 11604.0 68 11604.0 69 9533.5 70 7463.0 71 6255.5 72 5048.0 73 4939.5 74 4831.0 75 4831.0 76 4044.5 77 3258.0 78 2363.0 79 1468.0 80 937.0 81 406.0 82 406.0 83 278.5 84 151.0 85 110.5 86 70.0 87 44.5 88 19.0 89 19.0 90 14.5 91 10.0 92 6.5 93 3.0 94 2.0 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1098534.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.88262026650881 #Duplication Level Percentage of deduplicated Percentage of total 1 74.57413481863765 35.70804979224259 2 14.149978514868922 13.55076096013454 3 4.70785641275356 6.762735026433811 4 2.0661088969095047 3.9572283095989285 5 1.10187930486024 2.638043416707378 6 0.6769364939470554 1.944809585052521 7 0.4552498797268163 1.5258989982133064 8 0.30167648639341843 1.1556048513048534 9 0.24293957586510811 1.0469325112970111 >10 1.4884286997881693 13.606953105946468 >50 0.15490142505075588 5.122616686255946 >100 0.07686532033329424 6.309984173142494 >500 7.610427164040848E-4 0.3155766299708248 >1k 0.0015220854328081696 1.703694733569398 >5k 1.902606791010212E-4 0.7278122681399882 >10k+ 5.707820373030636E-4 3.9232989519900605 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGT 18303 1.6661295872499167 No Hit ATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATG 14065 1.280342711286132 No Hit TCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGTCTT 10697 0.9737522916905621 Illumina PCR Primer Index 10 (95% over 22bp) ACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCC 7989 0.7272419424432925 No Hit CTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGTCTTC 4234 0.3854227543253099 Illumina PCR Primer Index 10 (95% over 23bp) CATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCGTC 3907 0.35565581038001554 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2708 0.24651034924726956 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2561 0.23312887903332988 No Hit CACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTATGCCG 1913 0.17414117360045298 No Hit TTATACACATCTCCGAGCCCACGAGACCGGAGCCTATCTCGTA 1296 0.11797541086575382 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 9.10304096186372E-5 0.0 5 0.0 0.0 0.0 9.10304096186372E-5 0.0 6 0.0 0.0 0.0 9.10304096186372E-5 9.10304096186372E-5 7 9.10304096186372E-5 0.0 0.0 9.10304096186372E-5 9.10304096186372E-5 8 9.10304096186372E-5 0.0 0.0 9.10304096186372E-5 9.10304096186372E-5 9 9.10304096186372E-5 0.0 0.0 1.820608192372744E-4 9.10304096186372E-5 10 1.820608192372744E-4 0.0 0.0 1.820608192372744E-4 9.10304096186372E-5 11 1.820608192372744E-4 0.0 0.0 1.820608192372744E-4 9.10304096186372E-5 12 1.820608192372744E-4 0.0 0.0 1.820608192372744E-4 9.10304096186372E-5 13 1.820608192372744E-4 0.0 0.0 1.820608192372744E-4 9.10304096186372E-5 14 1.820608192372744E-4 0.0 0.0 1.820608192372744E-4 9.10304096186372E-5 15 1.820608192372744E-4 0.0 0.0 2.730912288559116E-4 9.10304096186372E-5 16 2.730912288559116E-4 0.0 0.0 3.641216384745488E-4 9.10304096186372E-5 17 2.730912288559116E-4 0.0 0.0 3.641216384745488E-4 9.10304096186372E-5 18 3.641216384745488E-4 0.0 0.0 3.641216384745488E-4 1.820608192372744E-4 19 4.55152048093186E-4 0.0 0.0 3.641216384745488E-4 1.820608192372744E-4 20 4.55152048093186E-4 0.0 0.0 4.55152048093186E-4 1.820608192372744E-4 21 5.461824577118232E-4 0.0 0.0 7.282432769490976E-4 1.820608192372744E-4 22 5.461824577118232E-4 0.0 0.0 9.10304096186372E-4 1.820608192372744E-4 23 5.461824577118232E-4 0.0 0.0 9.10304096186372E-4 1.820608192372744E-4 24 5.461824577118232E-4 0.0 0.0 0.001274425734660921 1.820608192372744E-4 25 5.461824577118232E-4 0.0 0.0 0.001365456144279558 1.820608192372744E-4 26 5.461824577118232E-4 0.0 0.0 0.0015475169635168324 1.820608192372744E-4 27 5.461824577118232E-4 0.0 0.0 0.002548851469321842 1.820608192372744E-4 28 5.461824577118232E-4 0.0 0.0 0.008829949733007809 1.820608192372744E-4 29 7.282432769490976E-4 0.0 0.0 0.020026690116100185 1.820608192372744E-4 30 7.282432769490976E-4 0.0 0.0 0.03613907261859897 1.820608192372744E-4 31 7.282432769490976E-4 0.0 0.0 0.08129015578944303 1.820608192372744E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2345 0.0 32.976547 1 TTATACA 2495 0.0 30.993986 2 TATACAC 2565 0.0 30.508772 3 CGTCTTC 555 0.0 27.666664 37 GATTACG 70 6.5920176E-9 26.42857 1 GGTATCA 525 0.0 25.72381 1 CCGTCTT 1710 0.0 25.423977 37 GCCGTCT 1720 0.0 25.276163 36 GTATCAA 1460 0.0 22.80822 1 AAGTACG 45 0.0038257027 20.555555 35 TGCCGTC 2190 0.0 19.851597 35 TACACAT 4220 0.0 18.982227 5 ATGCCGT 2320 0.0 18.818966 34 ATACACA 4315 0.0 18.778679 4 CGCGCTT 60 9.236461E-4 18.5 12 ATGTACG 60 9.236461E-4 18.5 11 TATGCCG 2420 0.0 17.964876 33 CGGTGTA 125 8.576535E-9 17.76 34 ACGGTAC 115 6.404116E-8 17.695652 3 AATCGTC 75 2.0671618E-4 17.266666 28 >>END_MODULE