##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename ERR1631167.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 495216 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.144316823365966 31.0 30.0 31.0 26.0 34.0 2 30.115789877548384 31.0 30.0 33.0 26.0 34.0 3 29.548903912636103 31.0 30.0 33.0 25.0 34.0 4 33.79733288100546 35.0 33.0 37.0 28.0 37.0 5 33.415846822396695 35.0 33.0 37.0 28.0 37.0 6 33.73223603437692 35.0 33.0 37.0 29.0 37.0 7 33.83289716002714 35.0 33.0 37.0 29.0 37.0 8 33.900403056444055 35.0 33.0 37.0 29.0 37.0 9 35.46916093179542 37.0 34.0 39.0 30.0 39.0 10 35.071605117766794 37.0 34.0 39.0 29.0 39.0 11 35.30696504151724 37.0 34.0 39.0 30.0 39.0 12 35.15994434751704 37.0 34.0 39.0 30.0 39.0 13 35.345130205809184 37.0 34.0 39.0 30.0 39.0 14 36.11428144486446 38.0 34.0 40.0 30.0 41.0 15 36.119549852993444 38.0 34.0 40.0 30.0 41.0 16 36.13327719621337 38.0 34.0 40.0 30.0 41.0 17 36.03676375561371 38.0 34.0 40.0 30.0 41.0 18 36.12601773771445 38.0 34.0 40.0 30.0 41.0 19 36.12754232496527 38.0 34.0 40.0 30.0 41.0 20 36.16647281186391 38.0 34.0 40.0 30.0 41.0 21 36.094379018448514 38.0 34.0 40.0 29.0 41.0 22 35.914619075312594 38.0 34.0 40.0 29.0 41.0 23 35.9370375755226 38.0 34.0 40.0 29.0 41.0 24 35.823549723756905 38.0 34.0 40.0 29.0 41.0 25 35.79326394946852 38.0 34.0 40.0 29.0 41.0 26 35.545576071855514 38.0 34.0 40.0 27.0 41.0 27 35.44740476882815 38.0 34.0 40.0 27.0 41.0 28 35.420293366934835 38.0 34.0 40.0 27.0 41.0 29 35.3309061096572 38.0 34.0 40.0 27.0 41.0 30 35.2270282058738 38.0 34.0 40.0 27.0 40.0 31 35.209985137798455 38.0 34.0 40.0 27.0 40.0 32 35.06357024005686 37.0 33.0 40.0 27.0 40.0 33 34.95895528415883 37.0 33.0 39.0 27.0 40.0 34 34.840722028367416 37.0 33.0 39.0 26.0 40.0 35 34.80209443959807 37.0 33.0 39.0 26.0 40.0 36 34.80654300345708 37.0 33.0 39.0 26.0 40.0 37 34.732516719976736 37.0 33.0 39.0 26.0 40.0 38 34.65440131175083 37.0 33.0 39.0 25.0 40.0 39 34.553915867015604 37.0 33.0 39.0 25.0 40.0 40 34.3833922975025 37.0 33.0 39.0 25.0 40.0 41 34.352001954702594 37.0 33.0 39.0 25.0 40.0 42 34.28609939905011 37.0 33.0 39.0 24.0 40.0 43 33.40852072630933 36.0 31.0 39.0 23.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 9.0 10 13.0 11 9.0 12 10.0 13 9.0 14 11.0 15 20.0 16 24.0 17 29.0 18 67.0 19 138.0 20 339.0 21 505.0 22 912.0 23 1500.0 24 2390.0 25 3719.0 26 5631.0 27 8158.0 28 11228.0 29 15142.0 30 19748.0 31 25430.0 32 32295.0 33 40252.0 34 50397.0 35 61756.0 36 69548.0 37 68843.0 38 55138.0 39 21942.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.55919841039062 24.678524118768376 16.23675325514523 22.52552421569578 2 15.09220219055927 23.709653969177086 39.09647507350328 22.101668766760362 3 16.78883557881813 29.755298697941907 33.42662595715809 20.029239766081872 4 12.557954508739622 19.75360246841782 36.23085683822816 31.45758618461439 5 11.91984911634519 39.79495815967174 34.596620464605344 13.688572259377727 6 26.65766049562211 40.071403185680595 17.792236115149755 15.478700203547543 7 23.294077735775904 34.762002843203774 22.347218183580498 19.596701237439824 8 24.79483700042002 34.63498756098349 23.11960841329844 17.450567025298053 9 23.513375981389938 15.186706406901232 19.067639171593807 42.232278440115024 10 14.24368356434364 28.545321637426902 33.65804012794417 23.55295467028529 11 30.778892442893607 23.423516203030598 24.173693903266454 21.62389745080934 12 19.799642984071596 27.748497625278667 28.750282704920682 23.701576685729055 13 29.926335174953962 20.8244483215405 25.981389938935738 23.267826564569805 14 21.719209395496105 23.86776679267229 26.354358502148557 28.058665309683047 15 24.286170075280282 29.390003554004718 22.663443830570902 23.6603825401441 16 24.003061290426803 28.004951374753645 23.08063552066169 24.91135181415786 17 20.366668282123356 31.327541921101094 24.518997770669767 23.78679202610578 18 22.745630189654616 26.378590352492647 25.567833026396563 25.307946431456173 19 23.574157539336372 29.93360473005719 25.52764854124261 20.96458918936383 20 22.168104423120415 26.121328874672873 26.172619624567865 25.53794707763885 21 24.495371716584277 26.354156570062358 26.87453555620174 22.275936157151627 22 20.78688895350716 30.752439339601306 25.469492100416787 22.991179606474752 23 24.58765467997803 25.764312946269914 26.31518367742561 23.33284869632645 24 21.72769054311654 29.389397757746117 26.04580627443378 22.837105424703562 25 21.55705793027689 27.209338955122615 27.603712319472717 23.629890795127785 26 21.964758812316244 30.36230654906142 26.574868340279796 21.09806629834254 27 20.855747794901617 28.44637491518852 26.367686019837812 24.33019127007205 28 21.163896158443993 26.406658912474555 30.216511582824463 22.212933346256985 29 20.469249781913344 27.434493231236473 26.160099835223416 25.936157151626766 30 22.50250395786889 26.04196956479597 29.50126813350134 21.954258343833803 31 21.81654066104488 26.380407741268456 27.05062033536881 24.752431262317856 32 21.840368647216568 26.68815224063843 29.50793189234597 21.963547219799036 33 21.6650915963943 28.02978902135634 29.353453846402378 20.951665535846985 34 20.71116442118187 29.177974863493912 26.71379761558593 23.397063099738297 35 20.98962876805273 25.802478110561854 33.09909211334044 20.108801008044974 36 22.732504604051567 27.36119188394559 25.61023876449872 24.29606474750412 37 22.33409259797745 26.35254111337275 28.63558527995864 22.677781008691156 38 21.952037090885593 25.137919614875127 28.34298568705373 24.567057607185554 39 25.049675293205386 25.951503990178022 26.811330813220895 22.18748990339569 40 20.846458918936385 25.143977577461147 32.26935317114148 21.74021033246099 41 22.65536654712287 26.895536493166617 26.535491583470648 23.913605376239865 42 22.02978094407289 24.960219379018447 30.904494200510484 22.105505476398175 43 23.31063616684437 24.476592032567606 29.134559464960745 23.07821233562728 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 7.0 1 6.5 2 6.0 3 34.0 4 62.0 5 62.0 6 112.5 7 163.0 8 161.5 9 160.0 10 246.0 11 332.0 12 332.0 13 565.5 14 799.0 15 1868.0 16 2937.0 17 3310.0 18 3683.0 19 3683.0 20 3839.0 21 3995.0 22 4904.5 23 5814.0 24 7355.5 25 8897.0 26 8897.0 27 10934.0 28 12971.0 29 15681.0 30 18391.0 31 20675.0 32 22959.0 33 22959.0 34 24954.0 35 26949.0 36 27992.0 37 29035.0 38 30884.5 39 32734.0 40 32734.0 41 33446.5 42 34159.0 43 33189.0 44 32219.0 45 32324.5 46 32430.0 47 32430.0 48 33437.0 49 34444.0 50 42063.5 51 49683.0 52 40928.5 53 32174.0 54 32174.0 55 36798.0 56 41422.0 57 34530.0 58 27638.0 59 20624.0 60 13610.0 61 13610.0 62 11943.0 63 10276.0 64 8520.0 65 6764.0 66 5514.0 67 4264.0 68 4264.0 69 3396.5 70 2529.0 71 2112.5 72 1696.0 73 1350.5 74 1005.0 75 1005.0 76 765.0 77 525.0 78 397.5 79 270.0 80 195.0 81 120.0 82 120.0 83 81.5 84 43.0 85 32.5 86 22.0 87 19.0 88 16.0 89 16.0 90 13.5 91 11.0 92 6.5 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 495216.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.56066746516582 #Duplication Level Percentage of deduplicated Percentage of total 1 87.14646984288225 52.776483809178934 2 7.93941449601267 9.616324823222808 3 1.8614418875704135 3.3819048947664716 4 0.8136213388177157 1.9709380537081072 5 0.4341443620269592 1.3146036170295619 6 0.2691338555809609 0.9779355558873921 7 0.2216913018847046 0.9398041249351499 8 0.14252952136867067 0.6905346358061847 9 0.13770608605657236 0.7505615237041429 >10 0.905556561039446 10.86927037991125 >50 0.08953625042801078 3.6789196328694556 >100 0.03407722953301795 3.486910894630544 >500 0.0016704524280891154 0.738697439729379 >1k 0.0016704524280891154 2.2120457706275816 >5k 0.001002271456853469 4.271738987950254 >10k+ 3.34090485617823E-4 2.323325856042853 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source ATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATG 11483 2.31878614584343 No Hit TCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTCTT 8748 1.766501890084327 Illumina PCR Primer Index 10 (95% over 21bp) ACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCC 6480 1.3085199185809828 No Hit CTTATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGT 5885 1.1883703272915254 No Hit CTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTCTTC 3135 0.6330570902394107 Illumina PCR Primer Index 10 (95% over 22bp) CATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGTC 2875 0.5805547478272107 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1731 0.34954444121353107 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 1612 0.32551452295563954 No Hit CACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCG 1580 0.31905269619721494 No Hit TTATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTA 857 0.173055797874059 No Hit TATACACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTAT 828 0.1671997673742367 No Hit ACATCTCCGAGCCCACGAGACACTCGCTAATCTCGTATGCCGT 781 0.15770895932280057 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 655 0.13226551646150367 No Hit GTTTTATTGTCTCTGCCTGGACTTCTAACATAGCATATGAGGT 530 0.10702400568640753 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 0.0 0.0 12 0.0 0.0 0.0 0.0 0.0 13 0.0 0.0 0.0 0.0 0.0 14 0.0 0.0 0.0 0.0 0.0 15 0.0 0.0 0.0 0.0 0.0 16 0.0 0.0 0.0 0.0 0.0 17 0.0 0.0 0.0 0.0 0.0 18 0.0 0.0 0.0 0.0 0.0 19 0.0 0.0 0.0 0.0 0.0 20 0.0 0.0 0.0 0.0 0.0 21 0.0 0.0 0.0 2.0193208620076895E-4 0.0 22 0.0 0.0 0.0 6.057962586023069E-4 0.0 23 0.0 0.0 0.0 0.0010096604310038447 0.0 24 0.0 0.0 0.0 0.0014135246034053827 0.0 25 0.0 0.0 0.0 0.0014135246034053827 0.0 26 0.0 0.0 0.0 0.0014135246034053827 0.0 27 0.0 0.0 0.0 0.0018173887758069205 0.0 28 0.0 0.0 0.0 0.005654098413621531 0.0 29 0.0 0.0 0.0 0.012519789344447675 0.0 30 0.0 0.0 0.0 0.019991276533876126 0.0 31 0.0 0.0 0.0 0.04604051565377532 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 865 0.0 31.653177 1 CGGTCGT 30 3.5965454E-4 30.833334 10 CTCGCCA 25 0.00549336 29.6 13 CCGGTCG 25 0.00549336 29.6 9 CGTCTTC 445 0.0 29.516853 37 TTATACA 1005 0.0 27.796019 2 GTATCAA 805 0.0 26.428572 1 TATACAC 1135 0.0 26.242292 3 GGTATCA 250 0.0 25.900002 1 CCGTCTT 1340 0.0 25.126863 37 GGTCGTG 45 1.3217264E-4 24.666668 11 GCCGTCT 1360 0.0 24.621325 36 TTCGTCC 40 0.0019296439 23.125 23 TCGTCCA 40 0.0019296439 23.125 24 CGCTTAA 45 0.0038227788 20.555557 1 CCGTACA 135 1.8189894E-12 20.555555 17 TGCCGTC 1650 0.0 20.293938 35 GTCCAAA 55 5.1374146E-4 20.181818 23 CGTTCGC 95 1.6713057E-7 19.473684 34 GCCCCGT 155 1.8189894E-12 19.096773 14 >>END_MODULE